Name: Vang Le
Type: User
Company: Aalborg University
Bio: Hacking Python, R, Javascript, C, C++, D, Java, Scala, SQL (MySQL, Postgres, SQLite), Docker, Singularity. Stopped writing new code in Perl. Eyeing Go, Julia.
Location: Aalborg, Denmark
Vang Le's Projects
Docker image for valgrind
VarDict Java port
Finding a scalable alternative to the VCF File for genomics analysis
VAST Prometheus Exporter
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
Viral genomics analysis pipelines
Deployment files related to https://github.com/broadinstitute/viral-ngs
VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number variants (CNVs) from targeted next-generation sequencing data.
WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data. NEWS: NOW INCLUDES AN INTERACTIVE RESULT BROWSER.
Example project we use in the reproducibility and documentation lessons.
xsq-convert converts Solid XSQ files to csfasta/qual files
xsq-info reads and prints information (metadata, number of reads) from a XSQ file
Converts SOLID XSQ/HDF files to fastq or csfasta files.
Utilities for converting SOLiD XSQ files
Mirror of the Z shell source code repository.