brentp Goto Github PK

go-giggle

golang wrapper to giggle

go-stree

A package for Go that can be used for range queries on large number of intervals

gobe

a fast, interactive, light-weight, customizable, web-based comparative genomics viewer with simple text input format.

gobio

miscellaneous script-like stuff in go for bioinformatics

gobitmapbenchmark

A Go project to benchmark various bitmap implementations (this is not a library!)

gocroaring

Go wrapper for CRoaring

goleft

goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

golsh

Approximate Nearest Neighbors in Go

goluaez

ez embedding lua in go

gonum

Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more

gqt

A genotype query interface.

grabix

a wee tool for random access into BGZF files.

graphics

biogo genomic graphics repository

gsort

sort genomic data

gwiz

hileup

horizontal pileup

hipstr

Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

homebrew-science

:microscope: Scientific formulae for the Homebrew package manager

hts

biogo high throughput sequencing repository

hts-nim

nim wrapper for htslib for parsing genomics data files

hts-nim-tools

useful command-line tools written to showcase hts-nim

hts-python

pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)

hts-zig

ziglang + htslib

htsuse

some C stuff that uses htslib

hugo-blog

not rendered content. ignore.

ififo

ififo provides a fast, sized, generic thread-safe FIFO in golang.

igv-reports

Python application to generate self-contained igv.js pages that can be opened within a browser with "file" protocol.

indelope

find large indels (in the blind spot between GATK/freebayes and SV callers)

inheritance

inheritance models for mendelian diseases

interlap

fast, pure-python interval overlap testing