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Name: Cellular Genetics Informatics
Type: Organization
Bio: Wellcome Sanger Institute
Location: United Kingdom
Blog: https://www.sanger.ac.uk/science/groups/cellular-genetics-informatics
Name: Cellular Genetics Informatics
Type: Organization
Bio: Wellcome Sanger Institute
Location: United Kingdom
Blog: https://www.sanger.ac.uk/science/groups/cellular-genetics-informatics
RNAseq pipeline for droplet based protocols
Teichlab asthma app
Analysis pipeline for ATACseq data using Nextflow
UNDER CONSTRUCTION: ATAC-seq peak-calling and differential analysis pipeline.
Wrapper scripts for convenient processing of bulk RNA-seq experiments
Set of scripts to run cell2location on farm
Demultiplex bam files on CB field and compute rudimentary per-sample QC
Sanger Cellular Genetics single-cell ATAC-seq pipeline.
Repo containing scripts for running cellbender
https://cellgeni.github.io/
Processing CITE-seq and cell hashing datasets with Cell Ranger
This repo includes the notebooks to test CellTypist by using the datasets downloaded from CELLxGENE portal by using Census.
An interactive explorer for single-cell transcriptomics data
Nextflow ChIP-seq Best Practise analysis pipeline
Cellgeni Docker files
Docker image for the Cellular Genetics Informatics JupyterHub
CellGen IT documentation
DropEst NF analysis pipeline
Computational prediction of editing outcomes resulting from Cas9-induced double strand breaks
Google Drive direct download of big files
Repository for storing general use configuration files for grnboost2
Get, merge & tar cram files with the same brush.
Testing image analysis tools for HuBMAP
A service for tracking imaging experiments in Cellular Genetics Programme
A web service to check exported datasets and start imaging pipelines on the imaging nodes
Dockerfile for iRods docker image
Collection of dockerfiles for paper supporting websites
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.