Comments (2)
Thank you for this feature request.
DeepConsensus is still at a proof-of-concept stage, but we are working on making it more scalable and easy to use outside of Google's internal infrastructure. I'll log this as a feature request in the meantime. Thanks!
from deepconsensus.
Hi @maximilianpress ,
We've made a release in January that cleaned up a code quite a bit, and we also no longer use pbmm2.
I'm going to close this issue now. But feel free to open another one if you encounter any issues with the latest release.
from deepconsensus.
Related Issues (20)
- Lower number of >Q30 average quality reads for v1.1 compared to v0.3 HOT 10
- Error detecting params.json using docker in debian (10) HPC HOT 2
- Installation from source file problem HOT 2
- lower quality and less reads in deepconsensus 1.0 output compared to ccs HOT 2
- python 3.9 HOT 2
- [Repeat] Running deepconsensus results in "free(): invalid pointer" error HOT 17
- QV for each ccs reads HOT 2
- Public raw train dataset availability HOT 2
- Cannot open/create ccs.bam file? HOT 6
- vRAM limit HOT 1
- the label without alignment HOT 5
- bam or fastq issue HOT 2
- Separate subreads for mixed samples? HOT 3
- GPU installation failure with pip HOT 3
- GPU installation using quick start guide fails HOT 5
- OSError: error -3 while reading file HOT 8
- normal pass / fail rate? HOT 2
- KeyError HOT 5
- About making ground truth. HOT 2
- Optimizing runtime on HPC HOT 2
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from deepconsensus.