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ETE (Environment for Tree Exploration) is a python toolkit intended for tree analysis and visualization. It provides both a comprehensive API to manipulate and operate with trees in a programmatic way, as well as a number of command line tools to easily compare, annotate, modify or render tree images. ETE is currently developed as a research tool in the context of genomics and phylogenetics, providing several specific modules for orthology and paralogy prediction, NCBI taxonomy queries, multiple sequence alignment integration and more.

Home Page: http://etetoolkit.org

License: GNU General Public License v3.0

Python 98.46% Makefile 0.01% C 0.05% Shell 0.12% Perl 6 1.20% CSS 0.05% JavaScript 0.07% HTML 0.06%

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