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ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample.

License: GNU Affero General Public License v3.0

Python 5.62% CMake 0.70% C++ 89.42% C 0.09% Shell 0.28% Brainfuck 3.83% Scala 0.06%
strains identification nanopore classification howdesbt spaced-seed long-reads minion strains-identification ori

ori's Introduction

Welcome to Grégoire Siekaniec's Profile

  • 👋 Hi, I’m Gregoire
  • 💻 Favorite language: Python
  • 💼 I am a bioinformatician searching for a postdoctoral position
  • 📄 For details on my scientific background my french resume can be found here
  • 🐇 Friends of rabbits
  • 🎨 Budding draughtsman
  • 🧗 Sports: climbing, slackline, longboard

Software

ORI is available here: ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample

LOTUS is available here: LOTUS (LOngiTUdinal comparative genomics Study) is a software for processing genomic data longitudinally to better understand the evolution between two or more conditions.


ori's People

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