hasihays Goto Github PK
Name: Hasi Hays (PhD)
Type: User
Company: University of Arkansas
Bio: Computational Systems Biology, Systems Medicine
Twitter: hasihays
Location: Fayetteville, Arkansas, USA
Hasi Hays (PhD)'s Projects
phenograph
Subpopulation detection in high-dimensional single-cell data
phyre
PHYRE is a benchmark for physical reasoning.
phys520
Physiology/Bioinformatics 520: Computational Systems Biology for Physiologists
physiboss
Multiscale simulation of multi-cellular system
physicell
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
physicell-jupyter-gui
Template Jupyter notebook for PhysiCell-powered nanoHUB apps
pkmodelling
Pharmokinetic Modelling
playing-with-qunatum-computing
Trying out different libraries, notes, codes
pluto.jl
🎈 Simple reactive notebooks for Julia
pmbio.org
Website for the precision medicine workshop
practical_cheminformatics_tutorials
Practical Cheminformatics Tutorials
precision-medicine-toolbox
Precision medicine toolbox
precisionmedicinetoolkit
Search public databases for given genotypic information
primekg
Precision Medicine Knowledge Graph (PrimeKG)
pybionetgen
A simple CLI for BioNetGen
pycircos
python Circos
pydeseq2
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
pyensembl
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
pyfish_tools
This repository contains various algorithms for analyzing image-based datasets, with a primary focus towards fluorescent in situ hybridization data.
pyfoomb
Framework for Object Oriented Modelling of Bioprocesses
pyjibe
GUI for AFM data analysis with an emphasis on biological specimens
pymcadre
pymCADRE enables the reconstruction of tissue-specific metabolic models in Python using transcriptomic data and information of the network topology.
pynanolab
all in one GUI software for data analysis and visualization
pypesto
python Parameter EStimation TOolbox
pysb
Python framework for Systems Biology modeling
pyspm
Python library to handle Scanning Probe Microscopy Images. Can read nanoscan .xml data, Bruker AFM images, Nanonis SXM files as well as iontof images(ITA, ITM and ITS).
pytcga
DEPRECATED: Store and query public TCGA data
pyth-ion
Pyth-Ion Nanopore Analysis
qmc
#quantum-annealing #qunatum-computing #TSP #quantum-montecarlo
qsar-drugdiscovery-with-rdkit
ChEMBL Database used to create Lipinski Descriptors (ADME Pharmokinetic Profile) to use in a Random Forest Regression Model
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