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LCRGenie

License: MIT License

Python 96.21% Dockerfile 2.02% Shell 1.77%

lcrgenie's Introduction

Ligase Chain Reaction

conda install -c conda-forge lcr_genie

python -m lcr_genie <input_file> <output_file> [--melting_temp TEMP]

where:

input is the path to an .xml SBOL file containing constructs designs and sequences
output is the path to the output spreadsheet
melting_temp is the target melting temperature for the bridging oligos

python -m lcr_genie tests/data/input/example.xml out.xlsx --melting_temp 60.0

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