Uniqprimer designs specific primers of bacterial sequences. The goal of this tool is to accept a number of "include" FASTA files of diagnostic target genomes (draft or complete) and "exclude" files of non-target genomes, and output a list of PCR primers that will amplify target genomes but not non-target genomes.
Uniqprimer has been developped in Colorado State University by Jan Leach Lab, and encapsulated in Galaxy by IRRI (International Rice Reasearch Institute) and South Green bioinformatics platform
GNU GPL v3