Comments (2)
Hi
How did you generate your bulkfile? Which settings did you use? It sounds as though you are trying to use a standard fast5 file output for basecalling and not a bulkfile here? Can you share the name of your fast5 file?
Thanks.
from readfish.
Indeed those are standard fast5 not in bulk format. We overlooked that requirement and didn't turn on the bulk fast5 output in previous seq. Seems no way to simulate old samples. Thanks for clarification.
from readfish.
Related Issues (20)
- "MinKNOW not found on this computer" HOT 1
- Optimizing breaktimes HOT 2
- [Question] Testing Readfish on FAST5 file without playback HOT 1
- Playback issue from own custom sequencing run HOT 5
- which branch of readfish is suitable? HOT 14
- Odd/Even channels on barcode aware sequencing HOT 4
- New Aligner HOT 2
- load config error HOT 28
- readfish can'tfind MinKnow (22.10.7) HOT 2
- Odd and even field HOT 4
- Refactor dead code HOT 1
- conda installation fails in Ubuntu 22.04 HOT 2
- Question R10/Q20+ barcoding HOT 1
- old biopython HOT 1
- read end reason HOT 1
- readfish 0.0.11a4 on MinION sequencing toml requires break_reads_after = 1.0 HOT 10
- pre-commit HOT 2
- Issues bot HOT 1
- Meaning of output in log file HOT 4
- Problem reproducing playback in the tutorial HOT 19
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from readfish.