Comments (5)
Yeah - these things should be caught.
We will add somethign to the readme - (@alexomics) - unfortunately this particular scenario hasn't happened on any of our testing machines - it's just been reported to us.
from readfish.
This is a frustrating issue which we think is caused by the MinKNOW RPC.
It appears that the RPC reports that it is ready but actually isn't - and this may be millisecond timing.
My advice at present would be to wait until the run is actually started before starting ru_generator.
I'll tag @alexomics for any further comment.
from readfish.
Thanks! Good to know it's probably not a configuration error on our side or something.
If you check MinKNOW during a normal start, it actually gives a "Finishing up" status somewhere during the initialization (I added a screenshot). Could be related to that?
In the meantime, maybe I missed it but it could be helpful to add that this situation can occur to the instructions?
from readfish.
This issue is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 5 days.
from readfish.
This issue was closed because there has been no response for 5 days after becoming stale.
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Related Issues (20)
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