This repository served as a coordination hub for a tool training that took place at the http://gcc2015.tsl.ac.uk/training-day/ Until further notice it is no longer maintained.
- this repository: http://bit.ly/trainhome
- tool training slide deck: http://bit.ly/traindeck
- head.xml is an example tool for the first part of training
- 2.fastq is example fastq file for testing seqtk
- .shed.yml is for package_seqtk_1_0_r75 used in Tool Shed publishing part
- Planemo docs: http://planemo.readthedocs.org/
- Standard Virtual Machine Image - follow http://planemo.readthedocs.org/en/master/appliance.html#launching-the-appliance-virtualbox-ova
- Vagrant - follow http://planemo.readthedocs.org/en/master/appliance.html#launching-the-appliance-vagrant
- Docker - follow http://planemo.readthedocs.org/en/master/appliance.html#launching-the-appliance-docker