Comments (2)
Installation error by pip again, network not work well:
Collecting git+https://github.com/NBISweden/EMBLmyGFF3.git
Cloning https://github.com/NBISweden/EMBLmyGFF3.git to /tmp/pip-req-build-t9m8lvli
Running command git clone --filter=blob:none --quiet https://github.com/NBISweden/EMBLmyGFF3.git /tmp/pip-req-build-t9m8lvli
fatal: unable to access 'https://github.com/NBISweden/EMBLmyGFF3.git/': Failed to connect to 10.31.6.91 port 80 after 130353 ms: Connection timed out
error: subprocess-exited-with-error
× git clone --filter=blob:none --quiet https://github.com/NBISweden/EMBLmyGFF3.git /tmp/pip-req-build-t9m8lvli did not run successfully.
│ exit code: 128
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× git clone --filter=blob:none --quiet https://github.com/NBISweden/EMBLmyGFF3.git /tmp/pip-req-build-t9m8lvli did not run successfully.
│ exit code: 128
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
from emblmygff3.
python_version>="3.8.0" has to be removed from setup.py
from emblmygff3.
Related Issues (20)
- How to add in comment or CC line HOT 1
- Webin-CLI validation failing due to duplicated feature locations in EMBLmyGFF3 flat file HOT 2
- thank you HOT 1
- ImportError Bio.Alphabet error HOT 1
- What the option "-a accesion" parameter should to be set(means:What type?) HOT 3
- TypeError: read() takes 1 positional argument but 2 were given? HOT 3
- attribute formats broken across several lines HOT 2
- Use of example data HOT 2
- Contigs are disorganised in the EMBL file HOT 10
- Warning qualifier unknown db_xref HOT 1
- Translation problem HOT 2
- Reporting the line number of the problematic input GFF3 files when parsing error is triggered HOT 2
- BioPython 1.81 installs via conda, but needs an older version HOT 2
- Not for ENA submission: Sequence too short
- Installation issue EMBLmyGFF3 & python version requirements
- Translation when circular genome and ORF in the cut of the assembly HOT 1
- unexpected keyword argument 'strand' HOT 3
- Gene sorting compared to fasta HOT 4
- Bug when specifying -g mitochrondrion (or plastid)
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from emblmygff3.