Comments (2)
Thanks for reporting! Yes, you’re right, it is correct that J discovery is always done in this version of IgDiscover, and with the default configuration, the discovered alleles are even used in subsequent iterations. I’ll see when I find some time to update the user guide. And thanks for appreciating the effort we put into the tool :-).
from igdiscover-legacy.
Great, thanks!
from igdiscover-legacy.
Related Issues (20)
- Parse Flash stats fails HOT 3
- Error: No V genes were discovered in this iteration HOT 11
- Where is the complete germline DataBase? HOT 1
- Error in rule read_length_histogram HOT 3
- Snakemake workflow problem with symlinks and temp() HOT 4
- Give sensible error message when running init without DISPLAY
- snakemake error HOT 12
- IgDiscover crashes if no arguments are given HOT 1
- Error running against the test data set HOT 3
- IgBlast error HOT 1
- length of CDR1 region is not divisible by three HOT 3
- Complain if the input reads contain non-nucleotide characters/spaces HOT 10
- error about Microsoft Visual C++ on installation HOT 1
- Solving environment: failed HOT 2
- Cannot install IgDiscover on M1 MacBook Pro HOT 3
- IgDiscover crashes with pandas 2.0.0 HOT 5
- error in_rule_read_length_histogram HOT 11
- trouble installing with conda HOT 2
- New IgDiscover repository
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