Comments (4)
d4straub
commented on May 28, 2024
Hi there, thanks for reporting this.
The pipeline expects that extraction of minikraken2_v2_8GB_201904.tgz yields a folder minikraken2_v2_8GB_201904 with the respective database files. The tgz archive you are using however contains a folder with a different name. To fix this, you could just rename the tgz file to match the folder name, i.e. minikraken2_v2_8GB_201904.tgz -> minikraken2_v2_8GB_201904_UPDATE.tgz. I haven't tested that, but I think that should work.
This should be actually fixed in the dev branch, see #54.
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artefaritaKuniklo
commented on May 28, 2024
okay， I have already fixed it and I will submit a pull soon
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d4straub
commented on May 28, 2024
I appreciate your effort, but as I said, it is fixed already.
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artefaritaKuniklo
commented on May 28, 2024
oh sorry, I just forgot that
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