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jfy133 avatar jfy133 commented on May 28, 2024

Suggestions:

  • komplexity
    • 👍 Should be fast (rust)
    • 👎 Module doesn't already exists
    • 👎 Not on bioconda
    • 👍 Allows masking vs removing
  • prinseq++
    • 👍 Should be fast (C++)
    • 👎 Module doesn't already exists
    • 👍 On bioconda already
    • 👍 Multithreaded
    • 👍 Two methods (entropy or dust)
  • bbduk (I don't think this is necessary, it's a bit awkward to use CLI wise, and I think the others will be suffient))
    • 👍 on bioconda
    • 👍 Module already exists

from taxprofiler.

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