R > methy_vim_out <- BiocParallel::bplapply(X = methy_tmle_ind,
... FUN = methyvim_tmle,
... methytmle_screened = methy_tmle,
... var_of_interest = var_of_interest,
... type = type,
... corr = corr_max,
... obs_per_covar = obs_per_covar,
... target_param = "ate",
... family = tmle_args$family,
... g_lib = tmle_args$g_lib,
... Q_lib = tmle_args$Q_lib,
... return_ic = return_ic
... )
Error in updt[[as.integer(i)]] <- .error(msg) :
attempt to select more than one element in integerOneIndex
In addition: Warning message:
In updt[[as.integer(i)]] <- .error(msg) : NAs introduced by coercion
R >
R > traceback()
8: value[[3L]](cond)
7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
6: tryCatchList(expr, classes, parentenv, handlers)
5: tryCatch({
foreach::foreach(X = X, .errorhandling = handle) %dopar%
FUN(X, ...)
}, error = function(e) {
txt <- "'DoparParam()' does not support partial results"
updt <- rep(list(.error_not_available(txt)), length(X))
msg <- conditionMessage(e)
i <- sub("task ([[:digit:]]+).*", "\\1", msg)
updt[[as.integer(i)]] <- .error(msg)
updt
})
4: bplapply(X, FUN, ..., BPREDO = BPREDO, BPPARAM = BPPARAM)
3: bplapply(X, FUN, ..., BPREDO = BPREDO, BPPARAM = BPPARAM)
2: BiocParallel::bplapply(X = methy_tmle_ind, FUN = methyvim_tmle,
methytmle_screened = methy_tmle, var_of_interest = var_of_interest,
type = type, corr = corr_max, obs_per_covar = obs_per_covar,
target_param = "ate", family = tmle_args$family, g_lib = tmle_args$g_lib,
Q_lib = tmle_args$Q_lib, return_ic = return_ic)
1: BiocParallel::bplapply(X = methy_tmle_ind, FUN = methyvim_tmle,
methytmle_screened = methy_tmle, var_of_interest = var_of_interest,
type = type, corr = corr_max, obs_per_covar = obs_per_covar,
target_param = "ate", family = tmle_args$family, g_lib = tmle_args$g_lib,
Q_lib = tmle_args$Q_lib, return_ic = return_ic)
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