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Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees in the UBC MSc Genetic Counselling Training Program, as they embark on a journey to learn about analyzing genomes.

Home Page: https://phillip-a-richmond.github.io/GenomeAnalysisModule/

License: Other

Shell 0.43% HTML 99.57%
genomics genome bioinformatics vancouver bcchr richmond ubc evidence2innovation bwamem short-read

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genomeanalysismodule's Issues

To Do

  • Download hg38 from illumina iGenomes
  • Index with bwa
  • Make synthetic data over a single gene
  • Map synthetic reads with BWA
  • Finish slide deck for class
  • Make quiz for linux testing
  • Run IGV on Orcinus
  • Test-run course with Emma
  • Test-run Linux primer
  • Explore Vidyo interface
  • Write up Course Learning Goals
  • Send out links to registered participants

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