Comments (3)
I apologize for the very late response to this.
I tried to dig this out of the Flye repo (https://github.com/fenderglass/Flye), and could not come to a conclusion on what it means to have 0 coverage.
I wonder if it is worth asking over on the Flye repo?
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Flye is probably only using the best match when calculating read coverage post-contig-generation. Odd that Flye generated those artifact contigs to start with, but them not being in the final assembly just shows that Flye / dragonflye is doing its job well :)
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I'm going to go ahead and close this, please feel free to reopen
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