Installation problem

[ruanjue]

Installation problem

[tseemann]

We need more information.

Or, you could install using Hombrew via brew install brewsci/bio/wtdbg2

[ruanjue]

It looks like you have killed it when compiling. Please try again.

[FAFUyangyang]

We need more information.

Or, you could install using Hombrew via brew install brewsci/bio/wtdbg2

I meet this information as follow，because there are too much，so I picked a part.
……
list.h:552:35: note: in expansion of macro ?.efine_list_core?
#define define_list(name, e_type) define_list_core(name, e_type, size_t, 0xFFFFFU)
^
kbm.h:544:1: note: in expansion of macro ?.efine_list?
define_list(tmpbmerv, kbm_tmp_bmer_t);
^
kbm.c: In function ?.bm_main?.
kbm.c:254:3: warning: implicit declaration of function ?.trcasecmp?.[-Wimplicit-function-declaration]
if(strcasecmp("start", argv[optind]) == 0) server = 1;
^
In file included from kbm.h:26:0,
from kbm.c:20:
filereader.h: In function ?.eadtable_filereader?.
filereader.h:514:1: warning: control reaches end of non-void function [-Wreturn-type]
}
^
make: *** [kbm] Error 1

[ruanjue]

Please attach the full message by dragging and dropping files.

Also please pay attend to the Garbled message, such as .?efine_list_core, should be caused by unicode.

[ammodramus]

I am also having this issue. I've attached the complete STDERR from make.
errormsg.txt

I'm using gcc 6.3.0. Same error with 4.8.5.

$ uname -a
Linux ln002.brc 3.10.0-693.11.6.el7.x86_64 #1 SMP Wed Jan 3 18:09:42 CST 2018 x86_64 x86_64 x86_64 GNU/Linux

[ammodramus]

Adding either #include <string.h> or #include "string.h" to kbm.h fixed this for me. (At least it compiled; I didn't test its functionality.) I didn't look closely at the difference between the system string.h and this program's string.h, so maybe the developers can decide which is correct to include here.

[lh3]

See also #36. For now, you can use the precompiled binary in the release page, or install via bioconda.

[ruanjue]

string.h will be renamed to chararray.h in next commit.