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Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis

License: GNU General Public License v2.0

Shell 0.02% Python 1.18% R 0.15% Jupyter Notebook 98.65%

spliz_pipeline's Introduction

Hi there 👋

Welcome to my GitHub

I'm a bioinformatician and biotechologist currently performing my PhD in transcriptomics data analysis and tool development in the Transcriptomics and Functional Genomics Lab at the Barcelona Supercomputing Center.

Experienced in next generation sequencing (NGS) data analysis, workflow development, statistical analysis and high-performance computing.

Interests:

single-cell RNA-seq transcriptomics multi-omics
splicing pipeline development

Publications:

Coding in:

R  Python  Nextflow

🛠 Tools

GitHub  Conda  Docker  Visual Studio Code 

⚙️  GitHub Analytics

🤝🏻  Connect with Me

spliz_pipeline's People

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