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Name: Musalula Sinkala
Type: User
Bio: A computational biologist with broad research interests that lie at the intersection of molecular medicine, data science and machine learning.
Location: Cape Town
Name: Musalula Sinkala
Type: User
Bio: A computational biologist with broad research interests that lie at the intersection of molecular medicine, data science and machine learning.
Location: Cape Town
Mutation Landscape of Cancer-Driver Genes Across Human Cancers
An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data
This training focuses on characterizing the whole genome sequences of Enterobacterales and Pseudomonas to improve diagnostics, develop targeted therapies, and enhance the understanding and control of the potentially harmful bacteria.
Learning Bash Scripting
Matlab code for some popular batch effect correction methods
Bayesian spatial propensity score matching
MATLAB source code to accompany the PLoS Genetics paper, "Integrated enrichment analysis of variants and pathways in genome-wide association studies indicates central role for IL-2 signaling genes in type 1 diabetes, and cytokine signaling genes in Crohn's disease".
A fast, scalable, high performance Gradient Boosting on Decision Trees library, used for ranking, classification, regression and other machine learning tasks for Python, R, Java, C++. Supports computation on CPU and GPU.
[source] CELLO - Cancer EvoLution toolbox for LOngitudinal data
Cancer Hallmark Annotator
Class Circleplot Project
Connectivity Map analysis in MATLAB
📊 Circular and Rectangular Manhattan Plot
ComfyUI Version of "Visual Style Prompting with Swapping Self-Attention"
make complex heatmaps as well as self define annotation graphics
Summer course content for Neuromatch Academy
Machine Learning-based prediction of COVID-19 diagnosis based on symptoms
Data Analysis Using Python
Contains code for the Data Science Specialization on Coursera
The Leek group guide to data sharing
DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data
Jupyter notebooks for reproducing the analyses in the paper 'A novel independence test for somatic alterations in cancer shows that biology drives mutual exclusivity but chance explains most co-occurrence'
dN/dS methods to quantify selection in cancer and somatic evolution
MATLAB code for making predictions for the DREAM Preterm Birth Prediction: see https://www.synapse.org/#!Synapse:syn18380862/wiki/ for details
Code sharing related to DREAM challenges
Perform T-test, Automated Transformation, Plotting and Reporting
Enrichment of Causal Loci and Identification of Pathogenic cells in Single Cell Expression and Regulation data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.