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evolution

Code accompanying The Evolutionary history of 2,658 cancers

faster_rcnn

Faster R-CNN

finemapping

A Nextflow framework for finemap

fingerprintjs2

Modern & flexible browser fingerprinting library

flux.jl

Relax! Flux is the ML library that doesn't make you tensor

forex-connect

For

forexconnectapi

Designed to trade, retrieve live/history price. Intended to be used to build auto-trading robots, custom trading on FXCM accounts.

fxcmapi.github.io

FXCM API

gdc-client

GDC Data Transfer Tool

gdscic50

An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.

genmap

GenMap - Fast and Exact Computation of Genome Mappability

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

hello-world-mcr

Test code for generating containers using Singularity and Matlab compiler.

hotnet2

HotNet2 is an algorithm for finding significantly altered subnetworks in a large gene interaction network

hpexome

An automated tool for processing whole-exome sequencing data

integrated-analysis-of-mapk-pathway-across-human-cancers

interpret

Fit interpretable models. Explain blackbox machine learning.

interpretablemodels.jl

Interpretable and Explainable AI/Machine Learning

kbmtl

Kernelized Bayesian Multitask Learning

lean-cli

CLI for running the LEAN engine locally and in the cloud

lenskit.github.io

LensKit web site

lightgbm-matlab

MATLAB wrapper for LightGBM

locuszoom-standalone

Create regional association plots from GWAS or meta-analysis

lollipops

Lollipop-style mutation diagrams for annotating genetic variations.

magnum-app

Java app for GWAS pathway and network analysis. This is the repository for the app, there is a separate repository for the command-line tool.

matlab-docker

Docker Image with Matlab Compiler Runtime and SSHD

matlab-dockerfile

Create a docker container that contains a MATLAB install

matlab-online

MATLAB Online Toolbox - Create interactive charts in your web browser with MATLAB and Plotly

matlaboanda_wrapper

Matlab wrapper for oanda API

metalhead.jl

Computer vision models for Flux