souzadevinicius/mondo

Mondo Disease Ontology

Mondo

This is the repository for managing the Mondo Disease Ontology (Mondo). Mondo aims to harmonizes disease definitions across the world. For more details on this ontology see:

• Mondo website: https://monarch-initiative.github.io/mondo
• OBO Foundry Mondo page: http://obofoundry.org/ontology/mondo.html

Versions

Stable release versions

• http://purl.obolibrary.org/obo/mondo.obo
• http://purl.obolibrary.org/obo/mondo.json
• http://purl.obolibrary.org/obo/mondo.owl

See Changes.md for more details

Editors' version

Editors of this ontology should use the edit version, src/ontology/mondo-edit.obo

Read the editors guide first!

https://mondo.readthedocs.io/en/latest/

Layout:

• src/
  • ontology ontology source, plus imports, Makefile
  • patterns templated design patterns
  • sparql SPARQL queries

Logo

The Mondo logo is available here: https://github.com/jmcmurry/closed-illustrations/tree/master/logos/mondo-logos

Cite

Mondo: Unifying diseases for the world, by the world, Nicole A Vasilevsky, Nicolas A Matentzoglu, Sabrina Toro, Joseph E Flack IV, Harshad Hegde, Deepak R Unni, Gioconda F Alyea, Joanna S Amberger, Larry Babb, James P Balhoff, Taylor I Bingaman, Gully A Burns, Orion J Buske, Tiffany J Callahan, Leigh C Carmody, Paula Carrio Cordo, Lauren E Chan, George S Chang, Sean L Christiaens, Louise C Daugherty, Michel Dumontier, Laura E Failla, May J Flowers, H. Alpha Garrett Jr., Jennifer L Goldstein, Dylan Gration, Tudor Groza, Marc Hanauer, Nomi L Harris, Jason A Hilton, Daniel S Himmelstein, Charles Tapley Hoyt, Megan S Kane, Sebastian Köhler, David Lagorce, Abbe Lai, Martin Larralde, Antonia Lock, Irene López Santiago, Donna R Maglott, Adriana J Malheiro, Birgit H M Meldal, Monica C Munoz-Torres, Tristan H Nelson, Frank W Nicholas, David Ochoa, Daniel P Olson, Tudor I Oprea, David Osumi-Sutherland, Helen Parkinson, Zoë May Pendlington, Ana Rath, Heidi L Rehm, Lyubov Remennik, Erin R Riggs, Paola Roncaglia, Justyne E Ross, Marion F Shadbolt, Kent A Shefchek, Morgan N Similuk, Nicholas Sioutos, Damian Smedley, Rachel Sparks, Ray Stefancsik, Ralf Stephan, Andrea L Storm, Doron Stupp, Gregory S Stupp, Jagadish Chandrabose Sundaramurthi, Imke Tammen, Darin Tay, Courtney L Thaxton, Eloise Valasek, Jordi Valls-Margarit, Alex H Wagner, Danielle Welter, Patricia L Whetzel, Lori L Whiteman, Valerie Wood, Colleen H Xu, Andreas Zankl, Xingmin Aaron Zhang, Christopher G Chute, Peter N Robinson, Christopher J Mungall, Ada Hamosh, Melissa A Haendel, medRxiv 2022.04.13.22273750; doi: https://doi.org/10.1101/2022.04.13.22273750

License

CC-BY 4.0

Contact

Please use this GitHub repository's Issue tracker to request new terms/classes or report errors or specific concerns related to the ontology.

Acknowledgements

This ontology repository was created using the ontology starter kit