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View Code? Open in Web Editor NEWR-API for MaveDB
License: GNU General Public License v3.0
R-API for MaveDB
License: GNU General Public License v3.0
Hi, Can you please help with retrieving all score sets for nucleotide variants, and how to interpret the values to be pathogenic or benign?
The code I am trying in R is:
s1 <- mave$getScoreSet("urn:mavedb:00000041-a-1")
s1$getScoreColumns()
Thanks
Hi ,
All data.frame datasets are requried to have a field labelled hgvs and score.
However, it appears as though the column for hvgs has been relabelled hgvs_pro . Are hvgs and hvgs_pro identical?
Can I just rename the column.
Thanks for the help.
-Bryce
The upcoming version of MaveDB fixes a bug allowing API calls to omit the model type directory. Currently /api/<urn>/
works but in the next update this will return a 404. The intended urls are:
/api/scoresets/<urn>/<file>/
/api/experimentsets/<urn>/
/api/experiments/<urn>/
I can fork this package and submit a PR if you would like?
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