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Name: Eric T. Dawson
Type: User
Company: @nvidia
Bio: Senior Scientist in Genomics, HPC and AI @nvidia
Twitter: erictdawson
Location: New York City
Blog: www.erictdawson.com
Name: Eric T. Dawson
Type: User
Company: @nvidia
Bio: Senior Scientist in Genomics, HPC and AI @nvidia
Twitter: erictdawson
Location: New York City
Blog: www.erictdawson.com
Linear-time, low-memory construction of variation graphs
Tools for the analysis of structural variation in genomes
Simulation toolbox for structural variations.
Swarm is a script designed to simplify submitting a group of commands to the Biowulf cluster.
Telomerecat: The telomere computational analysis tool
A software for calculating telomere length
A template for new Python libraries.
Open source software library for numerical computation using data flow graphs.
A semi-curated list of genomegraph tools!
A tidyverse-style package for plotting mutational signatures and context counts.
A header-only C++ FASTA parser and indexer
A header-only GFA file indexer (think .fai for GFA files)
(The beginnings of) A small VCF parser with an emphasis on speed and simplicity.
Set up GISTIC2 workflow (no marker file required)
Draw UpSet plots with Matplotlib
Filtering and profiling of next-generational sequencing data using region-specific rules
DL based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/
Convert VCF files to a tidy, tab-separated format
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
Merge M1 and M2 vcfs into a maflite
tools for working with variation graphs
A docker file for vg (github.com/vgteam/vg), linked to an automatic build on Dockerhub.
Datasets and scripts and general things for building machine learning tools with VG.
Contains source code for vg dependencies that are often installed via a package manager.
WDL implementation of https://github.com/ICGC-TCGA-PanCancer/CGP-Somatic-Docker
Structural variant detection and association testing
The Open Source Dictionary
succinct labeled graphs with collections and paths
A C++ header-only ZLib wrapper
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.