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pacbiohifi sequencing genomes analysis using the verkko, hifiasm and the genomeasm4pg.

License: MIT License

Shell 100.00%
genome-annotation genome-assembly genome-sequencing pacbio-data pacbio-sequencing slurm-cluster slurm-job slurm-workload-manager

pacbiohifi-universitat-potsdam's Introduction

pacbiohifi-universitat-potsdam

a slurm configuration analytical pipline for the analysis of the pacbiohifi sequencing genomes using the verkko, hifiasm and the genomeasm4pg. only provide the link to the sequencing or the files with the folder and rest it will do the work. please change the variables or else use the version tomorrow which has the complete support for the auxillary analysis also. added the support for the maternal and the parental sequences and the auxillary analysis as well as the meryl and the merqury configuration.

Gaurav
Academic Staff Member
Bioinformatics
Institute for Biochemistry and Biology
University of Potsdam
Potsdam,Germany

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