Topic: pacbio-data Goto Github
Some thing interesting about pacbio-data
Some thing interesting about pacbio-data
pacbio-data,SMP: A Salmonella Methylation analysis Pipeline
User: aukehaver
pacbio-data,🌈Scaffold genome sequence assemblies using linked or long read sequencing data
Organization: bcgsc
pacbio-data,A set of tootkit for dealing with COI amplicons using Pacbio sequencing platform
User: comery
Home Page: https://academic.oup.com/gigascience/article/6/12/gix104/4564465?login=false
pacbio-data,Hormiphora californensis genome annotation and supplemental materials related to the genome assembly.
User: conchoecia
pacbio-data,SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read data.
Organization: deepomicslab
pacbio-data,De novo repeat inference from long reads
User: fcunial
pacbio-data,code getter for illumina, pacbio, oxford long reads alignments.
User: gauravcodepro
pacbio-data,awk code for pacbiohifi alignments from verkko and other genome assembly methods
User: gauravcodepro
pacbio-data,bcftools for dealing with bcf files.
User: gauravcodepro
pacbio-data,gawk and awk combined functions for working with pacbiohifi aligned data.
User: gauravcodepro
pacbio-data,lastz alignment sorting and plotting the alignment length
User: gauravcodepro
pacbio-data,polyATGC pacbio or oxford nanopore long reads trimmer.
User: gauravcodepro
pacbio-data,pattern detection in R using the stringR package for the pacbio and the oxford nanopore reads
User: gauravcodepro
pacbio-data,long_read_polyATGC_trimmer using regular expression.
User: gauravcodepro
pacbio-data,a pacbiohifi analyzer for pacbiohifi reads from sequence analysis to the graph alignments.
User: gauravcodepro
Home Page: https://gauravcodepro.github.io/pacbiohifi-analyzer/
pacbio-data,a pacbiohifi read check for the quick view of the read types.
User: gauravcodepro
pacbio-data,pacbiohifi sequencing genomes analysis using the verkko, hifiasm and the genomeasm4pg.
User: gauravcodepro
pacbio-data,genome assembly to pangraphs from illumina to long reads.
User: gauravcodepro
pacbio-data,a streamlit component for reading and plotting the PacBioHiFi sequencing reads.
User: gauravcodepro
Home Page: https://app-pacbiohifi.streamlit.app/
pacbio-data,Inter-sample analysis of SQANTI classifications
User: jacobwindsor
pacbio-data,A workflow for processing CCS reads of AMF to ASVs using DADA2
User: katjako
pacbio-data,Pipeline to provide high accuracy single molecule consensus sequences from PacBio data using unique molecular identifiers (UMIs).
Organization: niaid
pacbio-data,Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads
Organization: pacificbiosciences
pacbio-data,Long read based human genomic structural variation detection with cuteSV
User: tjianghit
pacbio-data,rMETL - realignment-based Mobile Element insertion detection Tool for Long read
User: tjianghit
pacbio-data,The `pacmill` python package is a bioinformatics pipeline that is developed to process microbial 16S amplicon sequencing data and produce PDF reports detailing taxonomical assignments along with other statistics.
User: xapple
pacbio-data,LRSDAY: Long-read Sequencing Data Analysis for Yeasts
User: yjx1217
Home Page: https://yjx1217.github.io/Yeast_PacBio_2016/software/
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