genomicsnx Goto Github PK

mvi-evaluation

Missing value imputation and evaluation, especially for metabolomics data sets

myvariant.info

MyVariant.info: Variant Annotation as a Service

nasqar

NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization

nativefier

Make any web page a desktop application

necare

NEtwork-based CAncer gene RElationship prediciton

neusomatic

NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection

nextgenmap-lr

NextGenMap-LR is a long-read mapper desigend to align PacBilo or Oxford Nanopore to (large) reference genomes

ngcgh

Tools for producing pseudo-cgh of next-generation sequencing data

ngi-chipseq

Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm

ngi-methylseq

Methylation (Bisulfite-Sequencing) Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

ngi-nextflowdocs

Common documentation for National Genomics Infrastructure pipelines built with Nextflow

ngi-rnaseq

Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

ngs_pathwayanalysis

Pathway Analysis with RNAseq

ngsplot

Quick mining and visualization of NGS data by integrating genomic databases

nojah

NOt Just Another Heatmap

normalizer

Code for normalizing count data.

nu-ngs01

NGS-1 Data analysis course

nu-ngs02

numpy-100

100 numpy exercises (with solutions)

numpy-tutorials

NumPy tutorials & educational content in notebook format

nushell

A new type of shell

oefinder

Identify ordering effect genes in single cell RNA-seq data

omics-analysis

Omics Analysis

omicsplayground

Visual self-service analytics platform for big omics data.

omicsvolcano

oncoenrichr

Cancer-dedicated gene set interpretation

open_pipelines

Pipelines for NGS data preprocessing by the Bock lab and friends

openmeta-analyst-

intuitive software for advanced meta-analysis

orchest

Build data pipelines, the easy way 🛠️

ouija

Incorporating prior knowledge in single-cell trajectory learning using Bayesian nonlinear factor analysis