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elton

commandline tool to access, review and index existing species interaction datasets

elton-archive

an archive for GloBI source datasets

elton-cache-builder

Makescript for preparing Elton datasets for publication on Zenodo

emec

ferrer-paris

Dataset extracted from Ferrer-Paris et al. 2014

fishbase

FishBase summarizes the accumulation and structuring of knowledge on fish biology and ecology

fmnh

Field Museum for Natural History RSS feed configuration for GloBI

foodwebsdatabase

Gray, C., Ma, A., Perkins, D., Hudson, L., Figueroa, D., & Woodward, G. (2015). Database of trophic interactions [Data set]. Zenodo. http://doi.org/10.5281/zenodo.13751

fricke2020

GloBI config to index Fricke, E.C., Svenning, J. Accelerating homogenization of the global plant–frugivore meta-network. Nature 585, 74–78 (2020). https://doi.org/10.1038/s41586-020-2640-y

fsca

gandhi2009

Gandhi, K. J. K., & Herms, D. A. (2009). North American arthropods at risk due to widespread Fraxinus mortality caused by the Alien Emerald ash borer. Biological Invasions, 12(6), 1839–1846. doi:10.1007/s10530-009-9594-1

gemina

Dataset extracted from Schriml et al. 2009

global-mammal-parasite-database

global-primate-parasite-database

Stephens, P. R., Pappalardo, P. , Huang, S. , Byers, J. E., Farrell, M. J., Gehman, A. , Ghai, R. R., Haas, S. E., Han, B. , Park, A. W., Schmidt, J. P., Altizer, S. , Ezenwa, V. O. and Nunn, C. L. (2017), Global Mammal Parasite Database version 2.0. Ecology, 98: 1476-1476. doi:10.1002/ecy.1799

globalbioticinteractions

Global Biotic Interactions provides access to existing species interaction datasets

globalbioticinteractions.github.io

source files for GloBI website

globalwebdb

GlobalWeb (https://globalwebdb.com): An online collection of food webs. 2012. University of Canberra, Australia.

globi-taxon-graph-patches

This repository contains patch procedures and patch files to document changes across versions of GloBI's Taxon Graph (see https://doi.org/10.5281/zenodo.755513).

globi-taxon-names

list of manual taxonomic name mappings and taxonomic stop words

globi-tiles

tool to generate vector tiles of GloBI data

globinizer

Checks whether datasets are ready for GloBI indexing

grange2021

configuration for GloBI to index: Grange, Z.L. et al., 2021. Ranking the risk of animal-to-human spillover for newly discovered viruses. Proceedings of the National Academy of Sciences, 118(15), p.e2002324118. Available at: http://dx.doi.org/10.1073/pnas.2002324118.

gray2015

Gray C, Ma A, Perkins D, Hudson L, Figueroa D, Woodward G (2015). Database of trophic interactions. Zenodo. http://dx.doi.org/10.5281/zenodo.13751

gryseels2020

configuration to help index species interactions in Gryseels, S., De Bruyn, L., Gyselings, R., Calvignac‐Spencer, S., Leendertz, F.H. and Leirs, H. (2020), Risk of human‐to‐wildlife transmission of SARS‐CoV‐2. Mam. Rev.. https://doi.org/10.1111/mam.12225

hafner

Data extacted from Hafner 1994

hechinger2011

Discover data in Ryan F. Hechinger, Kevin D. Lafferty, John P. McLaughlin, Brian L. Fredensborg, Todd C. Huspeni, Julio Lorda, Parwant K. Sandhu, Jenny C. Shaw, Mark E. Torchin, Kathleen L. Whitney, and Armand M. Kuris 2011. Food webs including parasites, biomass, body sizes, and life stages for three California/Baja California estuaries. Ecology 92:791–791. http://dx.doi.org/10.1890/10-1383.1 .

hoenle2019

GloBI configuration to index: Hoenle, P.O. et al., 2019. Species‐level predation network uncovers high prey specificity in a Neotropical army ant community. Molecular Ecology, 28(9), pp.2423–2440. Available at: http://dx.doi.org/10.1111/mec.15078

hosts

configuration to help GloBI index Gaden S. Robinson; Phillip R. Ackery; Ian Kitching; George W Beccaloni; Luis M. Hernández (2023). HOSTS (from HOSTS - a Database of the World's Lepidopteran Hostplants) [Data set resource]. Natural History Museum. https://data.nhm.ac.uk/dataset/hosts/resource/877f387a-36a3-486c-a0c1-b8d5fb69f85a

ices

Dataset extracted from: International Council for the Exploration of the Sea (ICES).

inaturalist

Helps GloBI to index species interaction data found in https://inaturalist.org