Installed /usr/local/lib/python3.5/dist-packages/pybids-0.10.0-py3.5.egg
Searching for numpy>=1.15.2
Reading https://pypi.python.org/simple/numpy/
Downloading https://files.pythonhosted.org/packages/21/94/5d48401d922ad494399f74a973445d831c888ef0cd9437a4276d8a63cfe5/numpy-1.18.0rc1.zip#sha256=7b0b915190cf60e691c17147f5d955e273d4c482b795a7bb168ad4a2fe2fb180
Best match: numpy 1.18.0rc1
Processing numpy-1.18.0rc1.zip
Writing /tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.cfg
Running numpy-1.18.0rc1/setup.py -q bdist_egg --dist-dir /tmp/easy_install-sxux54o6/numpy-1.18.0rc1/egg-dist-tmp-z1qc6e0y
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_mt19937.pyx
�[91mTraceback (most recent call last):
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 61, in process_pyx
from Cython.Compiler.Version import version as cython_version
ImportError: No module named 'Cython'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 238, in <module>
main()
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 234, in main
find_process_files(root_dir)
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 225, in find_process_files
process(root_dir, fromfile, tofile, function, hash_db)
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 191, in process
processor_function(fromfile, tofile)
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/tools/cythonize.py", line 66, in process_pyx
raise OSError('Cython needs to be installed in Python as a module')
OSError: Cython needs to be installed in Python as a module
�[0m�[91mRunning from numpy source directory.
/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py:425: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
run_build = parse_setuppy_commands()
�[0mCythonizing sources
�[91mTraceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 157, in save_modules
yield saved
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 198, in setup_context
yield
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 255, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 285, in run
return func()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 253, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 47, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 450, in <module>
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 433, in setup_package
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 240, in generate_cython
RuntimeError: Running cythonize failed!
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "setup.py", line 204, in <module>
'Source': 'https://github.com/jmtyszka/bidskit/',
File "/usr/lib/python3.5/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.5/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/install.py", line 67, in run
self.do_egg_install()
File "/usr/lib/python3/dist-packages/setuptools/command/install.py", line 117, in do_egg_install
cmd.run()
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 436, in run
self.easy_install(spec, not self.no_deps)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 680, in easy_install
return self.install_item(None, spec, tmpdir, deps, True)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 727, in install_item
self.process_distribution(spec, dist, deps)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 772, in process_distribution
[requirement], self.local_index, self.easy_install
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 846, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 1118, in best_match
return self.obtain(req, installer)
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 1130, in obtain
return installer(requirement)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 699, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 725, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 906, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1145, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1131, in run_setup
run_setup(setup_script, args)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 258, in run_setup
raise
File "/usr/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 198, in setup_context
yield
File "/usr/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 169, in save_modules
saved_exc.resume()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 144, in resume
six.reraise(type, exc, self._tb)
File "/usr/lib/python3/dist-packages/pkg_resources/_vendor/six.py", line 685, in reraise
raise value.with_traceback(tb)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 157, in save_modules
yield saved
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 198, in setup_context
yield
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 255, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 285, in run
return func()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 253, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 47, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 450, in <module>
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 433, in setup_package
File "/tmp/easy_install-sxux54o6/numpy-1.18.0rc1/setup.py", line 240, in generate_cython
RuntimeError: Running cythonize failed!
�[0mThe command '/bin/sh -c python3 setup.py install' returned a non-zero code: 1