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paternity-

R package for paternity analysis.

paternitytestux

UI/UX to test a paternity test algorithm

pcgr

Personal Cancer Genome Reporter (PCGR)

pdx-analysis-workflows

phylowgs

Application for inferring subclonal composition and evolution from whole-genome sequencing data.

pir

Estimation of isoelectric point of peptides and proteins using Support vector machines

plip

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Salentin et al. (2015), https://www.doi.org/10.1093/nar/gkv315

pori

Platform for Oncogenomic Reporting and Interpretation (PORI)

pre-pe

Preprocessing paired-end reads produced with experiment-specific protocols

primedrpa

primerdesign

A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants

primerdesign-1

Package to design primers for MutaSeq and related methods

priset

Tool for identifying primer sequences for metabarcoding experiments given a taxonomy and a reference database.

proteinmpnn

Code for the ProteinMPNN paper

pymol-open-source

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

pyrosetta.notebooks

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

python-100-days

Python - 100天从新手到大师

python-docx-template

Use a docx as a jinja2 template

qvina

Accurately speed up AutoDock Vina

rapsearch2

Reduced Alphabet based Protein similarity Search

rcellmarker

Identify cell type based on cell markers for single cell squencing

reditools2

reference_data

Reference data: BED files, genes, transcripts, variations.

ria2

Source code for R in Action, Second Edition

rnafusion

RNA-seq analysis pipeline for detection gene-fusions

scanpy

Single-cell analysis in Python. Scales to >1M cells.

sccatch

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

sccustomize

Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.

scg_lib_structs

Collections of library structure and sequence of popular single cell genomic methods

scissor

Scissor package