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View Code? Open in Web Editor NEWcorrplot of LDSC genetic correlation results
Home Page: https://www.nature.com/articles/s41588-018-0047-6
License: GNU General Public License v3.0
corrplot of LDSC genetic correlation results
Home Page: https://www.nature.com/articles/s41588-018-0047-6
License: GNU General Public License v3.0
Hello. I am stuck at the final stages of generating the plot. I get a blank pdf and no png.
The error I get is here below. Any help with this?
Rscript plot_corrplot_rg.R input_rg.txt traitlist.txt corrplot 0.85 loaded Aggregation function missing: defaulting to length Aggregation function missing: defaulting to length Error in symbols(Pos, add = TRUE, inches = FALSE, squares = DAT.p, bg = col.fill, : invalid symbol parameter Calls: corrplot_nsquare -> corrplot -> symbols Execution halted
Hi,
If I don't have FDR can I still draw the plot using this tool? Thank you.
Best,
Kai
Can someone help resolve the issue, I input the above code in R and got the following error:
Rscript plot_corrplot_rg.R input_rg.txt traitlist.txt
Error: unexpected symbol in "Rscript plot_corrplot_rg.R"
Dear
I just tested it with example files provided.
But it did not work at the very last step with the error message as seen below. Please let me know.
corrplot_nsquare(rg, traitlist1$TRAIT, traitlist2$TRAIT, landscape=TRUE)
Error in match.arg(method) :
'arg' should be one of “circle”, “square”, “ellipse”, “number”, “shade”, “color”, “pie”
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