nbisweden Goto Github PK

grsworkflow

Repository for development of workflow for use case 1.1

guessmylt

An efficient way to guess the library type of your RNA-Seq data.

harbor-helm

Harbor helm chart for BP AI registry

hicscaff

homepage_rshiny.nbis.se

homepage for rshiny.nbis.se

homo-horreum

htsget-refserver

Reference server implementation for the GA4GH HTSget API standard.

htsget-rs

Rust htsget server

htslib

C library for high-throughput sequencing data formats

htslib-crypt4gh

HTSlib crypt4gh plug-in

hugo.bp.datasets.nbis.se

Bigpicture landing pages and data description pages using HUGO

igdiscover-legacy

Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

irods-b2safe-vagrant

A Vagrant "box" config with iRODS 4.x, B2SAFE, on a CentOS 6.5 64bit VirtualBox VM

k9-wgs-pipeline

Nextflow pipeline for standardised variant calls on canine genomes

kanki-irodsclient

Cross-Platform iRODS GUI Client

knowledgetransfercrashcourses

knox

Knox Documentation

knox-epouta

Connection between Knox (Sweden) and ePouta (Finland)

libpredweb

Library for prediction web-server

lingon

A d-mer based genome assembly pipeline

localega

Please go to to https://github.com/EGA-archive/LocalEGA instead

localega-auth

Authentication of EGA users

localega-deploy-swarm

Docker Swarm deployment of LocalEGA

localega-deploy-terraform

Terraform deployment of LocalEGA on openstack

localega-helm

Helm chart to deploy LocalEGA to any kubernetes cluster.

localega-qc

localega-se-logitor

ltr_finder

LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.

lts-a_andersson_2010-mascseq

Repository for long term support project 'Massive and parallel single-cell sequencing of eukaryotic plankton'

lts-biodiversityanalysiscao

Code repository for the support project P_Snoeijs-Leijonmalm_2205