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This is the development home of the workflow management system Snakemake. For general information, see

Home Page: https://snakemake.readthedocs.io

License: MIT License

Shell 0.07% Dockerfile 0.04% Python 40.94% Vim Script 0.09% CSS 0.09% Roff 0.01% Rebol 0.01% R 0.02% Makefile 0.02% Julia 0.01% HTML 58.66% Jupyter Notebook 0.04%

snakemake's Introduction

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Snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.readthedocs.io

Note: Snakemake has just (Oct 4 2019) moved from bitbucket.org/snakemake/snakemake to Github. Forks and stars are not yet insightful here!

Copyright (c) 2012-2019 Johannes Köster [email protected] (see LICENSE)

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