Topic: pubmed Goto Github
Some thing interesting about pubmed
Some thing interesting about pubmed
pubmed,Parse PubMed XML into a data frame in R
User: christopherbelter
pubmed,Sample code and explanations for doing basic text mining tasks in R
User: christopherbelter
pubmed,Rich Context API integrations for federating metadata discovery and exchange across multiple scholarly infrastructure providers
Organization: coleridge-initiative
Home Page: https://pypi.org/project/richcontext-scholapi/
pubmed,A Python package to download full article PDFs from OA publications
User: ddomingof
pubmed,A text mining tool for developing visual and interactive relationship networks from PubMed article information.
Organization: developmentac
pubmed,Trends in scientific publishing delays
User: dhimmel
Home Page: http://blog.dhimmel.com/history-of-delays/
pubmed,Extract relevant informations in PubMed papers in a simple way.
User: dsupertramp
pubmed,Turbocharge a PubMed literature search using citation counts and data from the NIH
User: dvklopfenstein
pubmed,A web tool that helps biomedical researchers understand how their work is being used by others, by analyzing the content in papers that cite them
User: hclent
pubmed,Computing term cooccurrence in MEDLINE
Organization: hetio
Home Page: https://doi.org/10.15363/thinklab.d67
pubmed,一个批量下载pubmed免费文献的python小工具
User: hiddenblue
pubmed,PubMed scraper for async search on a list of keywords and concurrent extraction of all found URLs, returning a DataFrame/CSV containing all article data (title, abstract, authors, affiliations, etc)
User: iliazenkov
pubmed,Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.
User: imamachi-n
pubmed,Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!
User: jakelever
pubmed,A framework for keeping biomedical text mining result up-to-date
User: jakelever
pubmed,Tools to scrape publication metadata from pubmed, arxiv, medrxiv and chemrxiv.
User: jannisborn
pubmed,Scientific literature explorer. Runs a Pubmed or Semantic Scholar search and allows user to explore high-level structure of result papers
Organization: jetbrains-research
pubmed,Automatic generation of reviews of scientific papers
Organization: jetbrains-research
Home Page: https://arxiv.org/abs/2010.04147
pubmed,Findpapers: A tool for helping researchers who are looking for related works
User: jonatasgrosman
pubmed,SciFive: a text-text transformer model for biomedical literature
User: justinphan3110
Home Page: https://arxiv.org/abs/2106.03598
pubmed,BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.
User: kareldo
pubmed,A high performance bibliographic information service
User: kermitt2
pubmed,Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
User: krassowski
Home Page: https://easy-entrez.readthedocs.io/en/latest/
pubmed,Code used to extract and analyse gender data from PubMed and arXiv in 2018 PLOS Biol paper
User: lukeholman
pubmed,I, Librarian - open-source version of a PDF managing SaaS.
User: mkucej
Home Page: https://i-librarian.net
pubmed,EasyPubMed is an extension to make new PubMed easy to use
User: naivenaive
pubmed,Write PubMed search results with two display options (citation or listview) to PDF or Word
User: nalomran
pubmed,Subclassification of disease states based on the intersection of literature and expression
Organization: ncbi-hackathons
pubmed,BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences
Organization: ncbi-nlp
pubmed,BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
Organization: ncbi-nlp
Home Page: https://arxiv.org/abs/1906.05474
pubmed,Data Collection API for pubmed
Organization: nfflow
pubmed,Fetches PubMed article IDs (PMIDs) from email inbox, then crawls PubMed, Google Scholar and Sci-Hub for respective PDF files.
User: pykong
pubmed,A web scrapping method to extract journal information from PubMed and Google Scholar using Python.
User: rafsanlab
pubmed,R Interface to Europe PMC RESTful Web Service
Organization: ropensci
Home Page: https://docs.ropensci.org/europepmc
pubmed,NLP framework in python for entity recognition and relationship extraction
Organization: rostlab
pubmed,Pull high-quality, efficient embeddings for PubMed, arXiv and Wikipedia from Huggingface and use for local LLM inference/Retrieval Augmented Generation (RAG)
Organization: somewheresystems
pubmed,MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)
User: suamin
Home Page: https://aclanthology.org/2022.coling-1.198
pubmed,Toolkits for NCBI Pubmed
User: suqingdong
Home Page: https://suqingdong.github.io/pypubmed/
pubmed,Node.js library for the Tychos API. The data transformation layer for AI.
Organization: tychos-ai
Home Page: https://www.tychos.ai
pubmed,Python library for the Tychos API. The data transformation layer for AI.
Organization: tychos-ai
Home Page: https://www.tychos.ai
pubmed,Scientific Paper Management Tool
User: ursjoss
pubmed,SUMPUBMED: Summarization Dataset of PubMed Scientific Article
User: vgupta123
Home Page: https://vgupta123.github.io/docs/sumpubmed_mainpaper.pdf
pubmed,ReCiter: an enterprise open source author disambiguation system for academic institutions
Organization: wcmc-its
pubmed,webpage crawling tools for pubmed, google scholar and rss
User: yufree
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.