vjcitn Goto Github PK

omicidxclient

R functions for querying Sean Davis' omicidx system

onto2022

Bioc2022 brief talk on ontology and ontoProc

ontologyplot

modifications to CRAN ontologyPlot to foster optional igraph rendering

ontoproc

ontoprocdata

some edits by vince

ontoprocpre2021

Ontology processing for Bioconductor

ontoprocpre314

personal repo separate from Bioc image, but should be kept in sync

orchestratingsinglecellanalysis

Content for the OSCA Book.

orgcharts

dot files

osca

The package wrapping the book, for deployment via the Bioconductor build system.

osca.advanced

Advanced steps of the OSCA book

osca.basic

Basics of the OSCA book

osca.intro

Introduction to the OSCA book.

osca.multisample

The multi-sample subbook of OSCA

osca.trajectory

Trajectory analyses with Bioconductor

osca.workflows

Workflows for the OSCA book.

osca4anvil

simple support for OSCA in AnVIL for Bioc 3.14

parody

outlier dytection

parody2

advanced github actions demonstration

parody3

testing GHA

parodygha

parody with GHA via biocthis

patelgbmsc

Lightly curated version of single-cell RNA-seq quantifications from CONQUER for PMID 24925914

pbmc10knsforest

Deploy the NSforest ipynb on a 17-feature dataset for 7k PBMC

pcmp

compare projection methods for scRNA-seq etc.

pcmpshin

support for shinyapps for examples of pcmp

pkgbuild

Find tools needed to build R packages

play4yes

probability illustrations with playing cards

pogos

PharmacOGenomics Ontology Support

probeoversnp

resources for identifying genomic assay probes that are occupied by common variants

prostate-project

A single package synthesizing the work of Yates Coley