Wellcome Trust Sanger Institute - Human Genetics Informatics's Projects
Human Genetics Informatics repository for samtools (not official release)
Ansible playbook for quickly starting instances of Treeserve
Single-Cell Clustering Assessment Framework
Semantic Annotations for Linked Avro Data
A command line based secrets manager
Additional high-throughput sequencing autoQC steps
Serapis archival system
Service orchestration and management tool.
A small module to allow global config settings to be set for all services within the ShareLaTeX architecture.
Quick tool to connect the HGI queues on RT to the MUC
A web-based collaborative LaTeX editor
Filesystem-agnostic distributed copy tool
Single Cell pipelines used at Sanger
baton, contained
Docker container and wrapper script that runs Singularity, mostly for building images
Javascript demonstration of smith waterman alignment
SoftPack Builder provides services for building SoftPack environments
SoftPack Core
SoftPack Documentation
Create an environment from an SHPC-style module file.
SoftPack Infrastructure as Code
Spack Templates
Softpack Web provides a graphical user interface for Softpack services.