Wellcome Trust Sanger Institute - Human Genetics Informatics's Projects
Serves bamcheck files from vrpipe via http
terraform and ansible codebase to provision clusters (e.g. hail/spark) at Sanger
CookieMonster setup for HGI
HGI flavour of docker registry Dockerfile
Builds on ISG's image-creation to allow provisioning images using entire ansible playbooks remotely
HGI's prebaked Jupyter notebook stack
HGI Project tracking database
Web frontend for qc data
Human Genetics Programme project and team group registry API
Client for the HGI Registry API
Various reports for compute and storage usage.
RT customisations for HGI
Orchestration and configuration management of hgi systems (using terraform & ansible)
Data retention policy tools
Serves QC data from vrtrack database via http.
Issue API access tokens to otherwise authenticated clients
User roles authentication module for HGI-web
Tools for Sanger humgen users to find out information about available disk quota.
SAM/BAM specification
C library for high-throughput sequencing data formats
Plugins for use with HTSlib
A HTTP server that will return a status code of your choice