wtsi-hgi Goto Github PK

git-common-sync

A tool to synchronise common files between Git repositories

github-to-gitlab-hook

Service to sync GitHub and GitLab repositories

gitlab-build-variables

Tools for managing GitLab CI pipeline build variables

gitlab-ci-git-push

Gitlab CI runner image that pushes to a remote Git repo (Dokku, Heroku, Deis, etc.)

gitlab-runner-canary

glance-proxy

Proxy to provide image data from glance via HTTP, using an S3 temporary store to support Range requests

go-authserver

A library to easily create an authenticated web server in Go

go-ceph

Go bindings for RADOS, RBD, and CephFS

go-infoblox

Golang Infoblox WAPI Library

graph

Graph package providing various implementations of graph data structures and graph processing algorithms.

gwas_display_app

App to display the gwas manhattan and qqplots generated from hail

hail

Scalable genomic data analysis.

hail_analysis_pipelines

Hail based analysis pipelines for HG projects

hail_jc_merge

hail scripts for merging cohorts

hapi-ur

HAPI-UR: HAPlotype Inference for UnRelated samples (cloned from: https://code.google.com/p/hapi-ur)

hattie

Control panel for HGI Users to Request work be done

helpful-genestack-scripts

Some useful scripts for use with genestack

henplus

HenPlus is a SQL shell that can handle multiple sessions in parallel. The commandline interface with the usual history functions features TAB-completion for commands, tables and columns. Database connect via JDBC.

hgc-deploy

Tools for creating and running Mercury containers. (now deprecated in favour of hgc-tools)

hgc-tools

Set of tools for working with Mercury capsules.

hgi-arvados-build

hgi-arvados-openstack

hgi-bamcheck-frontend

hgi-bamcheck-server

Serves bamcheck files from vrpipe via http

hgi-cloud

terraform and ansible codebase to provision clusters (e.g. hail/spark) at Sanger

hgi-cookie-monster

CookieMonster setup for HGI

hgi-docker-registry

HGI flavour of docker registry Dockerfile

hgi-image-creation

Builds on ISG's image-creation to allow provisioning images using entire ansible playbooks remotely

hgi-jupyter-notebook

HGI's prebaked Jupyter notebook stack

hgi-k8s