I'm having a hard time installing hic2cool. Pip fails:
pip install -e hic2cool/
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7.
Obtaining file:///home/fc464/software/HiCAssembler/hic2cool
ERROR: Complete output from command python setup.py egg_info:
ERROR: warning: build_py: byte-compiling is disabled, skipping.
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:0: warning: "PyUnicode_FromString" redefined
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:194:0: note: this is the location of the previous definition
# define PyUnicode_FromString PyUnicodeUCS2_FromString
^
ext/_yaml.c: In function โ__pyx_pf_5_yaml_get_version_stringโ:
ext/_yaml.c:1888:17: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
__pyx_v_value = yaml_get_version_string();
^
ext/_yaml.c: In function โ__pyx_pf_5_yaml_7CParser___init__โ:
ext/_yaml.c:3388:52: warning: passing argument 2 of โyaml_parser_set_inputโ from incompatible pointer type [-Wincompatible-pointer-types]
yaml_parser_set_input((&__pyx_v_self->parser), __pyx_f_5_yaml_input_handler, ((void *)__pyx_v_self));
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:1367:1: note: expected โint (*)(void *, unsigned char *, size_t, size_t *) {aka int (*)(void *, unsigned char *, long unsigned int, long unsigned int *)}โ but argument is of type โint (*)(void *, char *, size_t, size_t *) {aka int (*)(void *, char *, long unsigned int, long unsigned int *)}โ
yaml_parser_set_input(yaml_parser_t *parser,
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:94:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/stringobject.h:91:32: warning: pointer targets in passing argument 2 of โyaml_parser_set_input_stringโ differ in signedness [-Wpointer-sign]
#define PyString_AS_STRING(op) (((PyStringObject *)(op))->ob_sval)
^
ext/_yaml.c:3629:59: note: in expansion of macro โPyString_AS_STRINGโ
yaml_parser_set_input_string((&__pyx_v_self->parser), PyString_AS_STRING(__pyx_v_stream), PyString_GET_SIZE(__pyx_v_stream));
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:1341:1: note: expected โconst unsigned char *โ but argument is of type โchar *โ
yaml_parser_set_input_string(yaml_parser_t *parser,
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__token_to_objectโ:
ext/_yaml.c:5463:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag_directive.handle); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 417, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:5463:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag_directive.handle); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 417, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:5475:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag_directive.prefix); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 418, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:5475:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag_directive.prefix); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 418, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:6477:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.alias.value); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 448, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:6477:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.alias.value); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 448, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:6561:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.anchor.value); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 451, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:6561:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.anchor.value); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 451, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:6645:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag.handle); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 454, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:6645:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag.handle); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 454, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:6657:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag.suffix); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 455, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:6657:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_token->data.tag.suffix); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 455, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
ext/_yaml.c:6781:38: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_DecodeUTF8(__pyx_v_token->data.scalar.value, __pyx_v_token->data.scalar.length, ((char *)"strict")); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 460, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__event_to_objectโ:
ext/_yaml.c:8462:42: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_tag_directive->handle); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 574, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:8462:21: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_tag_directive->handle); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 574, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:8474:42: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_tag_directive->prefix); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 575, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:8474:21: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_tag_directive->prefix); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 575, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:8717:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.alias.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 586, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:8717:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.alias.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 586, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:8821:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.scalar.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 591, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:8821:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.scalar.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 591, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:8862:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.scalar.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 594, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:8862:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.scalar.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 594, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
ext/_yaml.c:8883:38: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_DecodeUTF8(__pyx_v_event->data.scalar.value, __pyx_v_event->data.scalar.length, ((char *)"strict")); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 595, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:9224:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.sequence_start.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 620, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:9224:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.sequence_start.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 620, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:9265:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.sequence_start.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 623, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:9265:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.sequence_start.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 623, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:9497:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.mapping_start.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 637, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:9497:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.mapping_start.anchor); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 637, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:9538:40: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.mapping_start.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 640, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:9538:19: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_4 = PyUnicode_FromString(__pyx_v_event->data.mapping_start.tag); if (unlikely(!__pyx_t_4)) __PYX_ERR(0, 640, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__compose_nodeโ:
ext/_yaml.c:11211:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.alias.anchor); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 734, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:11211:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.alias.anchor); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 734, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:11531:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.scalar.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 750, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:11531:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.scalar.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 750, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:11587:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.sequence_start.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 753, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:11587:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.sequence_start.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 753, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:11643:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.mapping_start.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 756, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:11643:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_6 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.mapping_start.anchor); if (unlikely(!__pyx_t_6)) __PYX_ERR(0, 756, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__compose_scalar_nodeโ:
ext/_yaml.c:12301:36: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_DecodeUTF8(__pyx_v_self->parsed_event.data.scalar.value, __pyx_v_self->parsed_event.data.scalar.length, ((char *)"strict")); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 791, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c:12524:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.scalar.tag); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 804, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:12524:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_2 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.scalar.tag); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 804, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__compose_sequence_nodeโ:
ext/_yaml.c:13062:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.sequence_start.tag); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 837, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:13062:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.sequence_start.tag); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 837, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.c: In function โ__pyx_f_5_yaml_7CParser__compose_mapping_nodeโ:
ext/_yaml.c:13687:38: warning: pointer targets in passing argument 1 of โstrlenโ differ in signedness [-Wpointer-sign]
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.mapping_start.tag); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 876, __pyx_L1_error)
^
ext/_yaml.h:6:66: note: in definition of macro โPyUnicode_FromStringโ
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:38:0,
from ext/_yaml.c:4:
/usr/include/string.h:395:15: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
extern size_t strlen (const char *__s)
^
In file included from ext/_yaml.c:596:0:
ext/_yaml.h:6:54: warning: pointer targets in passing argument 1 of โPyUnicodeUCS2_DecodeUTF8โ differ in signedness [-Wpointer-sign]
#define PyUnicode_FromString(s) PyUnicode_DecodeUTF8((s), strlen(s), "strict")
^
ext/_yaml.c:13687:17: note: in expansion of macro โPyUnicode_FromStringโ
__pyx_t_3 = PyUnicode_FromString(__pyx_v_self->parsed_event.data.mapping_start.tag); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 876, __pyx_L1_error)
^
In file included from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/Python.h:85:0,
from ext/_yaml.c:4:
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:174:31: note: expected โconst char *โ but argument is of type โyaml_char_t * {aka unsigned char *}โ
# define PyUnicode_DecodeUTF8 PyUnicodeUCS2_DecodeUTF8
^
/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/include/python2.7/unicodeobject.h:750:23: note: in expansion of macro โPyUnicode_DecodeUTF8โ
PyAPI_FUNC(PyObject*) PyUnicode_DecodeUTF8(
^
ext/_yaml.c: In function โ__pyx_pf_5_yaml_8CEmitter___init__โ:
ext/_yaml.c:15018:53: warning: passing argument 2 of โyaml_emitter_set_outputโ from incompatible pointer type [-Wincompatible-pointer-types]
yaml_emitter_set_output((&__pyx_v_self->emitter), __pyx_f_5_yaml_output_handler, ((void *)__pyx_v_self));
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:1829:1: note: expected โint (*)(void *, unsigned char *, size_t) {aka int (*)(void *, unsigned char *, long unsigned int)}โ but argument is of type โint (*)(void *, char *, size_t) {aka int (*)(void *, char *, long unsigned int)}โ
yaml_emitter_set_output(yaml_emitter_t *emitter,
^
ext/_yaml.c: In function โ__pyx_f_5_yaml_8CEmitter__object_to_eventโ:
ext/_yaml.c:16370:44: warning: pointer targets in assignment differ in signedness [-Wpointer-sign]
__pyx_v_tag_directives_end->handle = PyString_AS_STRING(__pyx_v_handle);
^
ext/_yaml.c:16485:44: warning: pointer targets in assignment differ in signedness [-Wpointer-sign]
__pyx_v_tag_directives_end->prefix = PyString_AS_STRING(__pyx_v_prefix);
^
ext/_yaml.c:16822:62: warning: pointer targets in passing argument 2 of โyaml_alias_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_alias_event_initialize(__pyx_v_event, __pyx_v_anchor) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:553:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_alias_event_initialize(yaml_event_t *event, yaml_char_t *anchor);
^
ext/_yaml.c:17537:63: warning: pointer targets in passing argument 2 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:17537:79: warning: pointer targets in passing argument 3 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:17537:92: warning: pointer targets in passing argument 4 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:17971:71: warning: pointer targets in passing argument 2 of โyaml_sequence_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_3 = ((yaml_sequence_start_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_sequence_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:601:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_sequence_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:17971:87: warning: pointer targets in passing argument 3 of โyaml_sequence_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_3 = ((yaml_sequence_start_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_sequence_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:601:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_sequence_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:18405:70: warning: pointer targets in passing argument 2 of โyaml_mapping_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_mapping_start_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_mapping_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:633:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_mapping_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:18405:86: warning: pointer targets in passing argument 3 of โyaml_mapping_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_mapping_start_event_initialize(__pyx_v_event, __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_mapping_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:633:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_mapping_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c: In function โ__pyx_pf_5_yaml_8CEmitter_12serializeโ:
ext/_yaml.c:19975:42: warning: pointer targets in assignment differ in signedness [-Wpointer-sign]
__pyx_v_tag_directives_end->handle = PyString_AS_STRING(__pyx_v_handle);
^
ext/_yaml.c:20090:42: warning: pointer targets in assignment differ in signedness [-Wpointer-sign]
__pyx_v_tag_directives_end->prefix = PyString_AS_STRING(__pyx_v_prefix);
^
ext/_yaml.c: In function โ__pyx_f_5_yaml_8CEmitter__serialize_nodeโ:
ext/_yaml.c:20947:65: warning: pointer targets in passing argument 2 of โyaml_alias_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_alias_event_initialize((&__pyx_v_event), __pyx_v_anchor) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:553:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_alias_event_initialize(yaml_event_t *event, yaml_char_t *anchor);
^
ext/_yaml.c:21758:68: warning: pointer targets in passing argument 2 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:21758:84: warning: pointer targets in passing argument 3 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:21758:97: warning: pointer targets in passing argument 4 of โyaml_scalar_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_scalar_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_value, __pyx_v_length, __pyx_v_plain_implicit, __pyx_v_quoted_implicit, __pyx_v_scalar_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:578:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_scalar_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:22145:76: warning: pointer targets in passing argument 2 of โyaml_sequence_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_sequence_start_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_sequence_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:601:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_sequence_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:22145:92: warning: pointer targets in passing argument 3 of โyaml_sequence_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_sequence_start_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_sequence_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:601:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_sequence_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:22675:75: warning: pointer targets in passing argument 2 of โyaml_mapping_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_mapping_start_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_mapping_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:633:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_mapping_start_event_initialize(yaml_event_t *event,
^
ext/_yaml.c:22675:91: warning: pointer targets in passing argument 3 of โyaml_mapping_start_event_initializeโ differ in signedness [-Wpointer-sign]
__pyx_t_2 = ((yaml_mapping_start_event_initialize((&__pyx_v_event), __pyx_v_anchor, __pyx_v_tag, __pyx_v_implicit, __pyx_v_mapping_style) == 0) != 0);
^
In file included from ext/_yaml.h:2:0,
from ext/_yaml.c:596:
/usr/include/yaml.h:633:1: note: expected โyaml_char_t * {aka unsigned char *}โ but argument is of type โchar *โ
yaml_mapping_start_event_initialize(yaml_event_t *event,
^
warning: install_lib: byte-compiling is disabled, skipping.
warning: install_lib: byte-compiling is disabled, skipping.
zip_safe flag not set; analyzing archive contents...
Installed /home/fc464/software/HiCAssembler/hic2cool/.eggs/PyYAML-5.1.1-py2.7-linux-x86_64.egg
Searching for pysam>0.8
Reading https://pypi.org/simple/pysam/
Downloading https://files.pythonhosted.org/packages/1b/7d/68b6555c7bb414b655495305d2add784c251fc83d4e698878e6d1d35fc9a/pysam-0.15.2-cp27-cp27m-manylinux1_x86_64.whl#sha256=34dd4cf08cbdea1329a140f5446c319992460d400b9851c0cb5607f3c58ad256
Best match: pysam 0.15.2
Processing pysam-0.15.2-cp27-cp27m-manylinux1_x86_64.whl
Installing pysam-0.15.2-cp27-cp27m-manylinux1_x86_64.whl to /home/fc464/software/HiCAssembler/hic2cool/.eggs
Installed /home/fc464/software/HiCAssembler/hic2cool/.eggs/pysam-0.15.2-py2.7-linux-x86_64.egg
Searching for pypairix
Reading https://pypi.org/simple/pypairix/
Downloading https://files.pythonhosted.org/packages/5a/52/6e44173759dcdaee003cf668fe8764b468c5b698e58f09540953961e6d36/pypairix-0.3.7.tar.gz#sha256=c1b47c05f92b5be628923c60a27344503ddeba5d8f35a3752d646271d38e0525
Best match: pypairix 0.3.7
Processing pypairix-0.3.7.tar.gz
Writing /tmp/easy_install-U1i2uV/pypairix-0.3.7/setup.cfg
Running pypairix-0.3.7/setup.py -q bdist_egg --dist-dir /tmp/easy_install-U1i2uV/pypairix-0.3.7/egg-dist-tmp-F2N6i7
src/bgzf.c:102:14: warning: function declaration isnโt a prototype [-Wstrict-prototypes]
static BGZF *bgzf_read_init()
^
src/bgzf.c: In function โbgzf_block_lengthโ:
src/bgzf.c:331:27: warning: unused variable โremainingโ [-Wunused-variable]
int count, block_length, remaining;
^
src/bgzf.c:330:40: warning: unused variable โcompressed_blockโ [-Wunused-variable]
uint8_t header[BLOCK_HEADER_LENGTH], *compressed_block;
^
src/bgzf.c: In function โbgzf_closeโ:
src/bgzf.c:456:11: warning: variable โcountโ set but not used [-Wunused-but-set-variable]
int ret, count, block_length;
^
src/bgzip.c:36:12: warning: function declaration isnโt a prototype [-Wstrict-prototypes]
static int bgzip_main_usage()
^
In file included from src/index.c:7:0:
src/bam_endian.h:6:19: warning: function declaration isnโt a prototype [-Wstrict-prototypes]
static inline int bam_is_big_endian()
^
In file included from src/index.c:4:0:
src/khash.h:129:31: warning: function declaration isnโt a prototype [-Wstrict-prototypes]
static inline kh_##name##_t *kh_init_##name() { \
^
src/khash.h:453:2: note: in expansion of macro โKHASH_INITโ
KHASH_INIT(name, uint32_t, khval_t, 1, kh_int_hash_func, kh_int_hash_equal)
^
src/index.c:51:1: note: in expansion of macro โKHASH_MAP_INIT_INTโ
KHASH_MAP_INIT_INT(i, ti_binlist_t)
^
src/khash.h:129:31: warning: function declaration isnโt a prototype [-Wstrict-prototypes]
static inline kh_##name##_t *kh_init_##name() { \
^
src/khash.h:484:2: note: in expansion of macro โKHASH_INITโ
KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal)
^
src/index.c:52:1: note: in expansion of macro โKHASH_MAP_INIT_STRโ
KHASH_MAP_INIT_STR(s, int)
^
src/index.c: In function โti_parse_region2dโ:
src/index.c:864:69: warning: passing argument 1 of โti_get_region_split_characterโ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
char region_split_character = ti_get_region_split_character(idx);
^
In file included from src/index.c:11:0:
src/pairix.h:218:14: note: expected โti_index_t * {aka struct __ti_index_t *}โ but argument is of type โconst ti_index_t * {aka const struct __ti_index_t *}โ
char ti_get_region_split_character(ti_index_t *idx);
^
src/index.c:878:30: warning: passing argument 1 of โti_get_sc2โ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
int dim = ti_get_sc2(idx)+1==0?1:2;
^
In file included from src/index.c:11:0:
src/pairix.h:209:13: note: expected โti_index_t * {aka struct __ti_index_t *}โ but argument is of type โconst ti_index_t * {aka const struct __ti_index_t *}โ
int ti_get_sc2(ti_index_t *idx);
^
src/index.c: In function โti_querys_2d_generalโ:
src/index.c:1219:31: warning: initialization from incompatible pointer type [-Wincompatible-pointer-types]
char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list);
^
src/index.c:1236:59: warning: passing argument 2 of โti_querys_2d_multiโ from incompatible pointer type [-Wincompatible-pointer-types]
sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list);
^
In file included from src/index.c:11:0:
src/pairix.h:131:28: note: expected โconst char **โ but argument is of type โchar **โ
sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs);
^
src/index.c:1242:30: warning: initialization discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
*sp=0; char *chr1 = reg;
^
src/index.c:1246:31: warning: initialization from incompatible pointer type [-Wincompatible-pointer-types]
char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list);
^
src/index.c:1263:59: warning: passing argument 2 of โti_querys_2d_multiโ from incompatible pointer type [-Wincompatible-pointer-types]
sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list);
^
In file included from src/index.c:11:0:
src/pairix.h:131:28: note: expected โconst char **โ but argument is of type โchar **โ
sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs);
^
src/index.c: In function โti_query_2d_tidโ:
src/index.c:1417:24: warning: return makes integer from pointer without a cast [-Wint-conversion]
if (name == 0) return ti_iter_first();
^
src/index.c: In function โcreate_merged_iterโ:
src/index.c:1469:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
if( miter->iu = calloc(n,sizeof(iter_unit*))) {
^
src/index.c: In function โmerged_ti_readโ:
src/index.c:1537:19: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
miu[i]->s = ti_iter_read(miu[i]->t->fp, miu[i]->iter, miu[i]->len, seqonly);
^
src/index.c:1543:17: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
miu[0]->s = ti_iter_read(miu[0]->t->fp, miu[0]->iter, miu[0]->len, seqonly); // get next entry for the flushed iter
^
src/index.c: In function โsequential_ti_readโ:
src/index.c:1573:15: warning: initialization discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
char *s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0);
^
src/index.c:1576:9: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0);
^
src/index.c: In function โget_unique_merged_seqnameโ:
src/index.c:1643:22: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
seqnames = ti_seqname(tbs[i]->idx,&len);
^
src/index.c: In function โflip_regionโ:
src/index.c:1744:19: warning: variable โsplit_posโ set but not used [-Wunused-but-set-variable]
int l, i, l2, split_pos;
^
src/index.c: In function โquerys_2D_wrapperโ:
src/index.c:1911:34: warning: passing argument 1 of โflip_regionโ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
char *reg2 = flip_region(reg, get_region_split_character(tb));
^
src/index.c:1743:7: note: expected โchar *โ but argument is of type โconst char *โ
char *flip_region ( char* s, char region_split_character) {
^
src/index.c: In function โcheck_triangleโ:
src/index.c:1971:23: warning: initialization from incompatible pointer type [-Wincompatible-pointer-types]
char **seqnames = ti_seqname(idx,&len);
^
src/index.c:1977:64: warning: passing argument 1 of โfreeโ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
if(ti_get_tid(idx, reg2)!=-1) { free(seqnames); free(reg2); return(0); } // not a triangle
^
In file included from src/khash.h:94:0,
from src/index.c:4:
/usr/include/stdlib.h:482:13: note: expected โvoid *โ but argument is of type โconst char *โ
extern void free (void *__ptr) __THROW;
^
src/index.c:1978:14: warning: passing argument 1 of โfreeโ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
free(reg2);
^
In file included from src/khash.h:94:0,
from src/index.c:4:
/usr/include/stdlib.h:482:13: note: expected โvoid *โ but argument is of type โconst char *โ
extern void free (void *__ptr) __THROW;
^
src/pairixmodule.c: In function โpairix_newโ:
src/pairixmodule.c:367:9: warning: unused variable โiโ [-Wunused-variable]
int i;
^
src/pairixmodule.c: In function โpairix_querys_2Dโ:
src/pairixmodule.c:559:28: warning: passing argument 1 of โflip_regionโ discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
reg2 = flip_region(reg, get_region_split_character(self->tb));
^
In file included from src/pairixmodule.c:34:0:
src/pairix.h:223:15: note: expected โchar *โ but argument is of type โconst char *โ
char* flip_region(char *s, char region_split_character);
^
src/pairixmodule.c: In function โpairix_get_blocknamesโ:
src/pairixmodule.c:603:23: warning: initialization from incompatible pointer type [-Wincompatible-pointer-types]
char **blocknames = ti_seqname(self->tb->idx, &n);
^
src/pairixmodule.c: In function โpairix_get_headerโ:
src/pairixmodule.c:693:15: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
while ((s = sequential_ti_read(siter, &len)) != 0) {
^
src/pairixmodule.c:704:15: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
while ((s = sequential_ti_read(siter, &len)) != 0) {
^
src/pairixmodule.c: In function โpairix_get_chromsizeโ:
src/pairixmodule.c:726:15: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
while ((s = sequential_ti_read(siter, &len)) != 0) {
^
src/pairixmodule.c:738:15: warning: assignment discards โconstโ qualifier from pointer target type [-Wdiscarded-qualifiers]
while ((s = sequential_ti_read(siter, &len)) != 0) {
^
warning: install_lib: byte-compiling is disabled, skipping.
warning: install_lib: byte-compiling is disabled, skipping.
zip_safe flag not set; analyzing archive contents...
Moving pypairix-0.3.7-py2.7-linux-x86_64.egg to /home/fc464/software/HiCAssembler/hic2cool/.eggs
Installed /home/fc464/software/HiCAssembler/hic2cool/.eggs/pypairix-0.3.7-py2.7-linux-x86_64.egg
Searching for pyfaidx
Reading https://pypi.org/simple/pyfaidx/
Downloading https://files.pythonhosted.org/packages/75/a5/7e2569527b3849ea28d79b4f70d7cf46a47d36459bc59e0efa4e10e8c8b2/pyfaidx-0.5.5.2.tar.gz#sha256=9ac22bdc7b9c5d995d32eb9dc278af9ba970481636ec75c0d687d38c26446caa
Best match: pyfaidx 0.5.5.2
Processing pyfaidx-0.5.5.2.tar.gz
Writing /tmp/easy_install-VBtocw/pyfaidx-0.5.5.2/setup.cfg
Running pyfaidx-0.5.5.2/setup.py -q bdist_egg --dist-dir /tmp/easy_install-VBtocw/pyfaidx-0.5.5.2/egg-dist-tmp-p7kNWb
warning: no files found matching 'docs/build/html/*'
warning: build_py: byte-compiling is disabled, skipping.
warning: install_lib: byte-compiling is disabled, skipping.
zip_safe flag not set; analyzing archive contents...
Moving pyfaidx-0.5.5.2-py2.7.egg to /home/fc464/software/HiCAssembler/hic2cool/.eggs
Installed /home/fc464/software/HiCAssembler/hic2cool/.eggs/pyfaidx-0.5.5.2-py2.7.egg
Searching for pandas>=0.19
Reading https://pypi.org/simple/pandas/
Downloading https://files.pythonhosted.org/packages/3e/a7/bfbaa1b8b2abc129793c329b37e69c54f5fd9a06f21a283ff91b17eaca73/pandas-0.25.0rc0.tar.gz#sha256=7fa6e3264009127c3b2c2dbd7257ec1301940c0bea0daae983d9d3ac0d7bb8a1
Best match: pandas 0.25.0rc0
Processing pandas-0.25.0rc0.tar.gz
Writing /tmp/easy_install-hMeZV8/pandas-0.25.0rc0/setup.cfg
Running pandas-0.25.0rc0/setup.py -q bdist_egg --dist-dir /tmp/easy_install-hMeZV8/pandas-0.25.0rc0/egg-dist-tmp-ZJ62cY
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/fc464/software/HiCAssembler/hic2cool/setup.py", line 58, in <module>
"Topic :: Scientific/Engineering :: Bio-Informatics"
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/__init__.py", line 144, in setup
_install_setup_requires(attrs)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/__init__.py", line 139, in _install_setup_requires
dist.fetch_build_eggs(dist.setup_requires)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/dist.py", line 717, in fetch_build_eggs
replace_conflicting=True,
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/pkg_resources/__init__.py", line 782, in resolve
replace_conflicting=replace_conflicting
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/pkg_resources/__init__.py", line 1065, in best_match
return self.obtain(req, installer)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/pkg_resources/__init__.py", line 1077, in obtain
return installer(requirement)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/dist.py", line 784, in fetch_build_egg
return cmd.easy_install(req)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 679, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 705, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 890, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 1158, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/command/easy_install.py", line 1144, in run_setup
run_setup(setup_script, args)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 253, in run_setup
raise
File "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/lib/python2.7/contextlib.py", line 35, in __exit__
self.gen.throw(type, value, traceback)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/python-2.7.13-yubmrmnjlffovbkco3hpujao4asp6pyl/lib/python2.7/contextlib.py", line 35, in __exit__
self.gen.throw(type, value, traceback)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 166, in save_modules
saved_exc.resume()
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 141, in resume
six.reraise(type, exc, self._tb)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 250, in run_setup
_execfile(setup_script, ns)
File "/home/fc464/software/HiCAssembler/lib/python2.7/site-packages/setuptools/sandbox.py", line 45, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-hMeZV8/pandas-0.25.0rc0/setup.py", line 21, in <module>
'scipy<=1.2.1',
File "/tmp/easy_install-hMeZV8/pandas-0.25.0rc0/versioneer.py", line 1629
print("Adding sample versioneer config to setup.cfg", file=sys.stderr)
^
SyntaxError: invalid syntax
----------------------------------------
ERROR: Command "python setup.py egg_info" failed with error code 1 in /home/fc464/software/HiCAssembler/hic2cool/
I need it for HiCAssembler which ueses python 2.7. Any conflict here?