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Name: Wayne's Bioinformatics Code Portal

Type: User

Company: Upstate Medical University

Location: Syracuse, NY, USA

Blog: http://fomightez.github.io/

Hello 👋

Hi, I'm Wayne. I'm a traditionally trained molecular biologist that is passionate about my biological research & helping other bench biologists learn how to handle data better using Python and R and by taking advantage of the cloud and containers.
Jupyter Distinguished Contributor

Find me around the web 🌎 :

Sharing information and Learning and posting on Twitter
Doing science on CyVerse🧬🧪🥽
Posting on Proteopedia🥼🥽
Helping at the Jupyter Community Discourse Forum💻
Helping folks at StackOverflow💻

Wayne's Bioinformatics Code Portal's Projects

test_json_appmode

test json fixing appmode

testcondabinder

testjmol

testing hosting page using jmol 14.1.6 on my github.io / gh-pages site ; jmol 14.1.6 downloaded from http://chemapps.stolaf.edu/jmol/jsmol/test2.htm . Link to test page is --->

testljl

testing if jupyterlab gets installed

testrtempl

Test a direct copy of the binder example r template

testruntimeandreqs

testing binder where have runtime and requirements.txt

text_mining

general text mining and text manipulation with Python scripts

the-littlest-jupyterhub

Simple JupyterHub distribution for 1-100 users on a single server

tophat_and_bowtie

Tophat2 and Bowtie compatibility

ugene_help

helpful tips for working with Unipro's UGENE sequence analysis software

upstategs647-021nanocourse

Upstate Medical GS647-021 Nanocourse: Structuring against Coronavirus

uscad16

Upstate Summer Career Awareness 2016 Exercise

utility-notebooks

Some simple utility notebooks

violinsuperplots-binder

Violin SuperPlots tutorial in your browser served via MyBinder.org

voici-demotest

Demo of Voici (Voila/JupyterLite)

voila-gallery.github.io

Public facing deployment for voila-gallery.org

vpython-jupyter

VPython running in a Jupyter notebook --> ADDED SEABORN in this fork

vscode-binder

VS Code on Binder

webplotdigitizer-binder

see if the webplotdigitizer runs in a MyBinder session

xlmod_docker

Dockerfile to build images that will run XL-MOD in modified CNS 1.21.

yeast_snornas

scripts and files for accounting for yeast snoRNAs among a gene list

yeastmine

using YeastMine (populated by SGD and powered by InterMine) to mine yeast Saccharomyces cerevisiae genetics data

yolov5

YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite

youtube-dl_docker

Dockerfile to build an image that runs youtube-dl

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