Topic: bioimaging Goto Github
Some thing interesting about bioimaging
Some thing interesting about bioimaging
bioimaging,3D volume rendering software for fluorescence microscopy
User: acto3d
Home Page: https://acto3d.github.io/
bioimaging,Visualisation software for imaging mass cytometry data
User: alanrace
bioimaging,Rust library for reading imaging mass cytometry (IMC) data stored in .mcd files.
User: alanrace
bioimaging,Python 3 x-ray simulator
User: anthonytec2
bioimaging,Paper on how to supress background while imaging gold nanorods through the use of the anti-Stokes emission.
User: aquilesc
Home Page: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5153559/
bioimaging,C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
User: arttumiettinen
bioimaging,Python libraries for loading, running and packaging bioimage.io models
Organization: bioimage-io
Home Page: https://bioimage-io.github.io/core-bioimage-io-python/
bioimaging,R package for visualization of highly multiplexed imaging data
Organization: bodenmillergroup
Home Page: https://bodenmillergroup.github.io/cytomapper/
bioimaging,Discover, install, and share napari plugins
Organization: chanzuckerberg
bioimaging,Graduation Project
User: chillxcode
bioimaging,SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
Organization: ciccalab
Home Page: https://github.com/ciccalab/SIMPLI/wiki
bioimaging,Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
Organization: czbiohub-sf
Home Page: https://czbiohub-sf.github.io/iohub/
bioimaging,Python code that I used in my blog posts on the Zarr file format.
User: fabriziomusacchio
Home Page: https://www.fabriziomusacchio.com/blog/2022-10-24-Zarr_and_images/
bioimaging,A Python3 Radial Image Analysis Toolkit
User: ggirelli
Home Page: https://ggirelli.github.io/radiantkit/
bioimaging,Interactive interface to visualize spectra and filter sets for any microscope. Easily customizable.
User: ggirelli
Home Page: https://ggirelli.github.io/SpectraScope/
bioimaging,BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster
Organization: nl-bioimaging
Home Page: https://nl-bioimaging.github.io/biomero/
bioimaging,Scripts for use with BIOMERO
Organization: nl-bioimaging
Home Page: https://nl-bioimaging.github.io/biomero/
bioimaging,Clone of https://git.embl.de/balazs/B3D
Organization: ome
bioimaging,OMERO.py Conda package
Organization: ome
Home Page: https://anaconda.org/ome/omero-py/
bioimaging,Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
Organization: ome
Home Page: https://ngff.openmicroscopy.org
bioimaging,Slides for a presentation about contributing to the napari community
User: psobolewskiphd
Home Page: https://psobolewskiphd.github.io/JAX_NEBioimaging_napari_community_slides/
bioimaging,DeepCOVIDExplainer: Explainable COVID-19 Diagnosis from Chest X-ray Images
User: rezacsedu
bioimaging,Analysis of variance (ANOVA) is a collection of statistical models and their associated estimation procedures (such as the "variation" among and between groups) used to analyze the differences among means.
User: sule213
bioimaging,TileDB BioImaging plugin for Napari
Organization: tiledb-inc
bioimaging,Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.
Organization: tiledb-inc
Home Page: https://tiledb-inc.github.io/TileDB-BioImaging/
bioimaging,Deploy an OMERO server using Docker Compose
Organization: turku-bioimaging
bioimaging,Worked with Dr. Shandong Wu at University of Pittsburgh to use software to improve outcomes for breast cancer risk detection.
User: yogionbioinformatics
Home Page: https://en.wikipedia.org/wiki/Bioimage_informatics
bioimaging,Predicting successful CME events using only clathrin markers. 🦠📈
Organization: yu-group
Home Page: https://yu-group.github.io/molecular-partner-prediction/
bioimaging,Zarr Official Blog
Organization: zarr-developers
Home Page: https://zarr.dev/blog
bioimaging,Zarr Homepage
Organization: zarr-developers
Home Page: https://zarr.dev/
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