Topic: edna Goto Github
Some thing interesting about edna
Some thing interesting about edna
edna,A snakemake workflow based on the obitools suite of programs, that analyzes DNA metabarcoding data.
User: annesoben
edna,Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies
Organization: aomlomics
Home Page: https://github.com/aomlomics/mitohelper/wiki
edna,Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)
User: bensutherland
edna,This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers
User: billzt
Home Page: https://mitofish.aori.u-tokyo.ac.jp/mifish/
edna,Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)
User: boopsboops
edna,Environmental DNA reflects common mitochondrial haplotypic variation
User: clare-edna
edna,In this research project a standardised AlphaFold 2-based molecular replacement strategy is developed and implemented in an existing biomolecule structure solution pipeline at MAX IV Laboratory. It can be run on high performance clusters similar to the LUNARC (https://www.lunarc.lu.se/). A standalone and implemented version of the pipeline exists.
User: dominiquefastus
edna,Supplementary files for the paper "Environmental DNA metabarcoding of Danish soil samples reveals new insight into the hidden diversity of eutardigrades in Denmark"
User: fridalp
edna,A collection of singularity recipies for bioinformatic pipelines.
User: grelot
edna,Data processing workflow and supplementary data for Li et al. 2018 - The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding
Organization: hulluni-bioinformatics
edna,Data processing workflow and supplementary data for Li et al. 2019 - Ground-truthing of a fish-based environmental DNA metabarcoding method for assessing the quality of lakes
Organization: hulluni-bioinformatics
edna,Standardized and Automated MetaBarcoding Analyses workflow (Mirror)
Organization: ifremer-bioinformatics
Home Page: https://gitlab.ifremer.fr/bioinfo/SAMBA-nextflow
edna,Supporting codes for Manu et al., Ecological Indicators (2023). Deep sequencing of extracellular eDNA enables total biodiversity assessment of ecosystems
User: manu-script
edna,Data & Code Supplement for "Environmental DNA as a management tool for tracking artificial waterhole use in savanna ecosystems"
User: maxfarrell
edna,Data and R code for "Environmental DNA (eDNA) metabarcoding differentiates between micro-habitats within the rocky intertidal" (Shea & Boehm)
User: meghanmshea
edna,metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.
User: metabarfactory
Home Page: http://metabaRfactory.github.io/metabaR
edna,repository of data examples for the R package metabaR
User: metabarfactory
Home Page: http://metabaRfactory.github.io/metabaR
edna,Amplicon sequencing analysis workflow using DADA2 and QIIME2
Organization: nf-core
Home Page: https://nf-co.re/ampliseq
edna,A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxa to identify (and remove) are Homo and Homo sapiens. Removal is optional.
Organization: nf-core
Home Page: https://nf-co.re/detaxizer
edna,Home of all SeMMAP data
User: oima-semmap
edna,website of the otterconnect project
User: oliviergimenez
Home Page: https://otterconnect.netlify.app/
edna,Primer scripts to produce meaningful visualisations from pre-processed metabarcoding data
User: s-myles
edna,This repository contains CO1 reference sets that can be used with the RDP Classifier, BLAST, or SINTAX to classify COI metabarcode sequences.
User: terrimporter
edna,TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data
User: tillmacher
Home Page: https://pypi.org/project/taxontabletools/
edna,unofficial Edna Mall showtime API
User: utopiaio
Home Page: https://ednamall.herokuapp.com
edna,Community Matrix Analysis
User: walterxie
edna,eDNA pipeline
User: walterxie
Home Page: http://walterxie.github.io/eDNA-pipeline/
edna,A set of functions for filtering erroneous sequences in eDNA metabarcoding data
User: yskoseki
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.