Topic: cell-free-dna Goto Github
Some thing interesting about cell-free-dna
Some thing interesting about cell-free-dna
cell-free-dna,R package to work with ctDNA sequencing data
User: alkodsi
Home Page: https://alkodsi.github.io/ctDNAtools/
cell-free-dna,Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
Organization: broadinstitute
cell-free-dna,As a tool for cancer subtype prediction, Keraon uses features derived from cell-free DNA (cfDNA) in conjunction with PDX reference models to perform both classification and heterogenous phenotype fraction estimation.
User: denniepatton
cell-free-dna,Structural Variants in cell-free tumor DNA
User: drvenki
cell-free-dna,
Organization: green-lab-mdacc
cell-free-dna,cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
User: hw538
cell-free-dna,Copy number calling and variant classification using targeted short read sequencing
User: lima1
Home Page: https://bioconductor.org/packages/devel/bioc/html/PureCN.html
cell-free-dna,Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
User: nickveltmaat
cell-free-dna,Bayesian-based fetal genotyping using maternal cell-free DNA and parental sequencing data.
User: nshomron
cell-free-dna,cell-free ChIP-seq pipeline
Organization: openomics
Home Page: https://openomics.github.io/cfChIP-seek/
cell-free-dna,An awesome set of epigenetic pipelines for bulk cfChip-seq, ChIP-seq, and ATAC-seq
Organization: openomics
Home Page: https://openomics.github.io/chrom-seek/
cell-free-dna,Hunting for CMV and HHV-6 in cfDNA sequence
User: vpeddu
cell-free-dna,cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data
Organization: xwanglabthu
Home Page: https://xwanglabthu.github.io/cfDNApipe/
cell-free-dna,A code to simulate the events of cell-free protein expression
User: zachariah-ibrahim
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