Topic: snvs Goto Github
Some thing interesting about snvs
Some thing interesting about snvs
snvs,This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
User: asw0049
snvs,A method for variant graph genotyping based on exact alignment of k-mers
Organization: bioinformatics-centre
snvs,Pipelines for SNVs and InDels calling (single sample and joint) in WEGS, WGS, and WES using GATK.
Organization: cerc-genomic-medicine
snvs,A somatic mutation signature simulator
User: edawson
snvs,This is the github repository for the Eichler lab Amazon Web Services (AWS) pipelines
Organization: eichlerlab
snvs,ClairS - a deep-learning method for long-read somatic small variant calling
Organization: hku-bal
snvs,ClairS-TO - a deep-learning method for tumor-only somatic variant calling
Organization: hku-bal
snvs,The Platinum Genomes Truthset
Organization: illumina
Home Page: https://illumina.github.io/PlatinumGenomes
snvs,Determine read depth and variant frequency thresholds to distinguish NGS sequencing errors from true SNPs. Simulates effect of changing per-site read depth and variant frequency on accuracy of genetic diversity measures (pi, alterante allele frequency, shannon diversity).
User: j3551ca
snvs,SNV calling workflow
User: julianspaeth
snvs,SNV calling from single cell sequencing
Organization: kchen-lab
snvs,A snakemake pipeline that performs variant calling of Nanopore reads from FastQ files for non-model organisms
User: myonaung
snvs,A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.
User: nalomran
snvs,Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
User: nickveltmaat
snvs,Microassembly based somatic variant caller for NGS data
Organization: nygenome
snvs,Generic human DNA variant annotation pipeline
User: sigven
snvs,Personal Cancer Genome Reporter (PCGR)
User: sigven
Home Page: https://sigven.github.io/pcgr
snvs,Codes for exome sequencing class being taught by Tychele N. Turner, Ph.D.
User: tycheleturner
snvs,Codes for genome sequencing class being taught by Tychele N. Turner, Ph.D.
User: tycheleturner
snvs,Detect and phase minor SNVs from long-read sequencing data
User: zhixingfeng
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