Topic: eukaryotes Goto Github
Some thing interesting about eukaryotes
Some thing interesting about eukaryotes
eukaryotes,SCGid, a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries
User: amsesk
eukaryotes,Sequence processing and analysis code used to investigate the effects of different DNA extraction methods and PCR variability on multi-taxon DNA meta-barcoding estimates of soil biodiversity.
User: andrewd789
eukaryotes,MegaVir is a bioinformatic pipeline for virome characterization and genome assembly.
User: balazshorvathreal
eukaryotes,Pangenome analysis of eukaryotes.
User: chmccarthy
eukaryotes, Datasets and statistics code used for "Objective 1" for PhD Thesis
User: cmlglvz
eukaryotes,A library to get information on organisms and UniProt identifiers. This includes growth temperature, growth ph, pfam domains, taxonomic lineage.
Organization: engqvistlab
eukaryotes,A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima
Organization: engqvistlab
eukaryotes,Pipeline for eukaryotic genome annotation based on external evidences
User: galikbence
eukaryotes,tiara – a tool for DNA sequence classification
Organization: ibe-uw
Home Page: https://ibe-uw.github.io/tiara/
eukaryotes,EuCAP, a Eukaryotic Community Annotation Package (adapted from the implementation developed for the Rice Genome Annotation Project)
Organization: jcvi-plant-genomics
eukaryotes,Simulation of the motion of the eukariotic cell Chlamydomonas Reinhardtii
User: lucapizzagalli
Home Page: https://lucapizzagalli.github.io/static/microswimmersSlides/slides.html
eukaryotes,NextITS pipeline documentation
Organization: next-its
Home Page: https://next-its.github.io
eukaryotes,Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
Organization: nf-core
Home Page: https://nf-co.re/metatdenovo
eukaryotes,Scripts for paper Vaulot et al. 2022
Organization: pr2database
eukaryotes,Protist Ribosomal Reference database (PR2) - SSU rRNA gene database
Organization: pr2database
eukaryotes,Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data
Organization: rogerlab
eukaryotes,This is a microbial amplicon sequence (16S and 18S iTag) data and analyses pipeline corresponding to the manuscript, "Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California" for public benefit and usage.
User: sabahzero
Home Page: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0212355
eukaryotes,MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
Organization: soedinglab
eukaryotes,A program that uses the Synteny Index algorithm to compare between Eukaryotes.
User: spanishcat
eukaryotes,V. M. Gumerov, E. P. Andrianova, M. A. Matilla, Karen M. Page, Elizabet Monteagudo-Cascales, A. C. Dolphin, T. Krell, I. B. Zhulin (2022). Amino acid sensor conserved from bacteria to humans.
User: toshkadev
Home Page: https://www.pnas.org/doi/10.1073/pnas.2110415119
eukaryotes,The Tree of Sex Ontology (TOSO) covers any trait related to reproduction included in the Tree of Sex database
Organization: tree-of-sex
Home Page: https://treeofsex.sanger.ac.uk/
eukaryotes,A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio
User: vmikk
Home Page: https://next-its.github.io
eukaryotes,examination of genome size across all kingdoms
User: wrf
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