Topic: protein-structure-prediction Goto Github
Some thing interesting about protein-structure-prediction
Some thing interesting about protein-structure-prediction
protein-structure-prediction,Calculating a range of protein descriptors using their physicochemical, biological and structural properties ๐ฌ.
User: amckenna41
protein-structure-prediction,ResNetQA: Improved protein model quality assessment by integrating sequential and pairwise features using deep learning
User: andersjing
protein-structure-prediction,Recurrent Geometric Networks for end-to-end differentiable learning of protein structure
Organization: aqlaboratory
protein-structure-prediction,CASP15 performance benchmarking of the state-of-the-art protein structure prediction methods
Organization: bhattacharya-lab
protein-structure-prediction,Hybridized distance- and contact-based hierarchical protein folding
Organization: bhattacharya-lab
protein-structure-prediction,An interactive visual simulator for distance-based protein folding
Organization: bhattacharya-lab
protein-structure-prediction,Distance-based protein model quality estimation using deep ResNets
Organization: bhattacharya-lab
protein-structure-prediction,Superposition-based Protein Embedded CA SC score
Organization: bhattacharya-lab
protein-structure-prediction,Differentiable Pairing using Alignment-based Language Models
Organization: bitbol-lab
Home Page: https://www.biorxiv.org/content/10.1101/2023.08.14.553209
protein-structure-prediction,Source code and dataset for 2022 Publication "Applying Deep Reinforcement Learning to the HP Model for Protein Structure Prediction"
Organization: compsoftmatterbiophysics-cityu-hk
protein-structure-prediction, A transformer network trained to predict end-to-end single sequence protein structure as a set of angles given amino acid sequences.
User: danielathome19
protein-structure-prediction,Protein Structure prediction using Hybrid Differential Evolution (HybridDE)
User: danielvarela
protein-structure-prediction,Evolutionary Computation methods applied to protein structure prediction and protein folding modeling with the Rosetta Software Suite
User: danielvarela
protein-structure-prediction,An unofficial re-implementation of DeepAb, an interpretable deep learning model for antibody structure prediction.
User: dohlee
protein-structure-prediction,An unofficial re-implementation of RoseTTAFold, a three-track deep learning model for protein structure prediction.
User: dohlee
protein-structure-prediction,Reticuloendotheliosis virus ENV, GAG and POL protein models.
User: elizaespinoza
protein-structure-prediction,NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction
User: eryk96
protein-structure-prediction,List of useful resources for the Bioinformatics and Computational Biology field
User: fpolticelli
protein-structure-prediction,Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
User: freshairtonight
protein-structure-prediction,Alpha-Protein: Protein Contact-map Prediction Boosted by Attention
User: galaxies99
protein-structure-prediction,personal RE-implementation of GANcon paper
User: galaxies99
protein-structure-prediction,Code for paper "Adversarial Attacks on Protein Language Models", Ginevra Carbone, Francesca Cuturello, Luca Bortolussi, Alberto Cazzaniga (2022).
User: ginevracoal
protein-structure-prediction,A method designed for proteome-scale sequence-based evaluation of protein-protein interfaces as defined by structural models of protein-protein interaction complexes.
Organization: honig-lab
protein-structure-prediction,A curated list of awesome protein design research, software and resources.
User: johnnytam100
protein-structure-prediction,Transformer model for protein structure prediction
User: kleinhenz
protein-structure-prediction,A balance-evolution artificial bee colony algorithm for protein structure optimization based on a three-dimensional AB off-lattice model
User: libai1943
protein-structure-prediction,A Rust implementation of the LightDock macromolecular docking software
Organization: lightdock
Home Page: https://lightdock.org/
protein-structure-prediction,A machine learning model that builds amino acids into a protein model.
User: liponan
Home Page: https://arxiv.org/abs/2007.06847
protein-structure-prediction,Implementation of Alphafold 3 in Pytorch
User: lucidrains
protein-structure-prediction,Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes
User: mircare
Home Page: http://distilldeep.ucd.ie/porter/
protein-structure-prediction,Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
Organization: ml4bio
protein-structure-prediction,PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
Organization: mpi-dortmund
protein-structure-prediction,Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.
User: okkevaneck
protein-structure-prediction,Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning โ่บๆๆกจโ็็ฉ่ฎก็ฎๅทฅๅ ท้
Organization: paddlepaddle
protein-structure-prediction,Protein structure prediction using optimization methods from the field of machine learning
User: philippthoelke
protein-structure-prediction,De novo protein structure prediction using iteratively predicted structural constraints
Organization: psipred
protein-structure-prediction,Fast and accurate protein structure prediction
Organization: psipred
protein-structure-prediction,Fragment assembly ab initio protein folding
Organization: psipred
protein-structure-prediction,Quantum algorithms for protein structure prediction. Language: Python (Qiskit). Platform: IBM Quantum's backends and simulators.
User: renatawong
protein-structure-prediction,Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
Organization: rosettacommons
Home Page: https://rosettacommons.github.io/PyRosetta.notebooks/
protein-structure-prediction,This project aims to solve a simplified version of the Protein Structure Prediction problem, represented as a combinatorial optimization task, using Reinforcement Learning.
User: samy-er
protein-structure-prediction,Source code for the manuscript: FingerprintContacts: Predicting Alternative Conformations of Proteins from Coevolution
Organization: shuklagroup
protein-structure-prediction,CB513 datasets for Protein Secondary Structure Prediction
User: taneishi
protein-structure-prediction,
Organization: thu-atom
Home Page: https://yanyanlan.com/project/airfold/
protein-structure-prediction,OPUS-Rota5: A Highly Accurate Protein Side-chain Modeling Method with 3D-Unet and RotaFormer
User: thuxugang
protein-structure-prediction,Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
User: twoxes
protein-structure-prediction,Python rich client for visual protein Sequence to Structure Analysis
User: urban233
protein-structure-prediction,An implementation of the DeepMind's AlphaFold based on PyTorch for research
User: urinx
protein-structure-prediction,
User: yoannpa
protein-structure-prediction,[ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding
Organization: zjunlp
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