Topic: circrna Goto Github
Some thing interesting about circrna
Some thing interesting about circrna
circrna,Repo for the script used in Nicolet et al. 2021 paper on the study of circRNA in megakaryoid and erythroid differentiation
User: bennicolet
circrna,Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers.
Organization: ccbr
Home Page: https://ccbr.ccr.cancer.gov/
circrna,Circrnas in Host And viRuses anaLysis pIpEline for Detection Annotation Quantification of circRNAs
Organization: ccbr
Home Page: https://ccbr.github.io/CHARLIE/
circrna,Classification of RNA-Seq samples using circRNA expression
User: cgodatascience
circrna, Predict circRNA pipeline
User: czheluo
circrna,Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformaticians scripts/ folder
Organization: dieterich-lab
circrna,CircRNA testing and ploting R package
Organization: dieterich-lab
circrna,:microscope: A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data
User: egaffo
circrna,:whale: Docker image for CirComPara
User: egaffo
circrna,A method for circular DNA detection based on probabilistic mapping of ultrashort reads
User: iprada
circrna,Convert and query IDs of circular RNAs from many different databases
Organization: jakobilab
Home Page: https://circhemy.jakobilab.org
circrna,Code supporting Fuchs et al. Defining the landscape of circular RNAs in neuroblastoma unveils a global suppressive function of MYCN (under review).
User: josc3006
circrna,circRNA ReAlign Inner Splice and Expression detection
User: liaoscience
circrna,BOVINE-circQTL is a code repository for the pipeline of circQTL identification and downstream analysis in bovine muscle tissue.
User: luffy563
circrna,This repository contains the results and comparison visualization of circRNA candidates detected by circRNA prediction softwares.
User: luffy563
circrna,This is a nextflow implementation of Circle RNA Analysis for Harvard Medical School, BWH.
User: mrniro
circrna,circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
Organization: nf-core
Home Page: https://nf-co.re/circrna
circrna,Circular RNA identification
User: osagiei
circrna,Tool for indexing and querying back-splice junctions of circular RNAs (circRNAs) in RNA-Seq datasets
User: pmenzel
circrna,A Python3-base pipeline for translated circular RNA(circRNA) identification
User: pssun
circrna,R language based circRNA visualization toolbox
User: pssun
circrna, detect exonic fusion circRNAs (fcRNAs) in diverse organisms
User: qjchu
circrna,An assembler for circular RNAs
Organization: shao-group
circrna,Bioinformatic identification and quantification of circRNAs encoded by HCMV
User: shaominyang
circrna,Analysis and visualization R scripts of my research γGenome-wide profiling of circular RNAs during the hybridization of two elite inbred lines of Gossypium hirsutum
User: shawnwx2019
circrna,The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
User: smangul1
Home Page: https://github.com/smangul1/rop/wiki
circrna,MARS method - github
User: uthrabalaji
circrna,An R-shiny app that provides backsplice and canonical splicing analysis for both circular RNA (circRNA) and parental transcripts
Organization: vccri
circrna,A sensitive and fast tool for circular RNA detection from RNA-Seq data
Organization: vpc-ccg
circrna,A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)
Organization: yanglab
Home Page: http://yanglab.github.io/CIRCexplorer
circrna,circular RNA analysis toolset
Organization: yanglab
Home Page: http://circexplorer2.readthedocs.org/
circrna,A pipeline to map junction reads for circular intronic RNAs (ciRNAs)
Organization: yanglab
circrna,Immune checkpoint blocakde-related circRNA signature (ICBcircSig) score model based on progression-free survival-related circRNAs to predict immunotherapy efficacy.
User: yelab2020
Home Page: https://github.com/Yelab2020/ICBcircSig
circrna,circRNA expression visualization in human acute and chonic wounds
User: zhuang-bio
Home Page: https://www.xulandenlab.com/tools
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