Topic: ensembl Goto Github
Some thing interesting about ensembl
Some thing interesting about ensembl
ensembl,To automate data collection from ICGC database.
User: ad115
Home Page: https://icgc-data-parser.readthedocs.io
ensembl,Package allowing easy integration of Ensembl querying with your R workflow
User: ainefairbrother
Home Page: https://ainefairbrother.github.io/ensemblQueryR/
ensembl,A small library to work with ensembl and other annotations in python
User: antonkulaga
ensembl,ProteomeGenomics Database Creation - Nextflow Pipeline
Organization: bigbio
ensembl,Python tools for proteogenomics analysis toolkit
Organization: bigbio
ensembl,VEP Community Tool to visualise VEP data using neXtProt tools.
Organization: calipho-sib
Home Page: https://calipho-sib.github.io/VEP-community-tool?nxentry=NX_P06213
ensembl,Public REST API (Endpoint for testing purposes) for Ensembl Gene Autocompetion Table
User: chanakade
ensembl,This application is created to query track infomation using provided data sources. (Ensembl Elastic-Search data source). Users can query throgh this application using provided parameters.
User: chanakade
Home Page: https://ensembl-ui.herokuapp.com/
ensembl,Provided tool will add explicit 3'UTR and extends it into a valid Ensembl GTF file. It's useful for 3'RNAseq when 3' coordinates might not be as good as you expect.
User: danilotat
ensembl,Working wiht the Ensembl Perl API
User: dhimmel
ensembl,3D hotspot mutation proximity analysis tool
Organization: ding-lab
ensembl,Tools for querying bioinformatics web resources
User: eggzilla
ensembl,The Ensembl Compara Perl API and SQL schema
Organization: ensembl
Home Page: http://www.ensembl.org/info/docs/api/compara/
ensembl,A collection of tools which Ensembl uses to work with Git
Organization: ensembl
ensembl,EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
Organization: ensembl
ensembl,'Docker Swarm' implementation of Ensembl Hive Meadow interface
Organization: ensembl
ensembl,API for accessing NCBI taxonomy
Organization: ensembl
ensembl,Specifications and implementation of the TrackHub registry
Organization: ensembl
ensembl,Project for Chanaka de Silva for GSOC 2017
Organization: ensemblgsoc
ensembl,A client for the Ensembl REST API written in the Python programming language
User: gawbul
Home Page: https://pypi.python.org/pypi/PyEnsemblRest/
ensembl,Tool in Perl for finding Polymorphisms in primers for human genes.
User: geizaguirre
ensembl,Anotação de VCF somático utilizando a ferramenta VEP ensembl 105 desenvolvido para tarefa avaliativa
User: giovannaprezia
ensembl,R package providing query functionality to BioMart instances like Ensembl
User: grimbough
Home Page: https://bioconductor.org/packages/biomaRt/
ensembl,This is the ensembldb development repository.
User: jorainer
Home Page: https://jorainer.github.io/ensembldb
ensembl,Some files used by the "MPI/multi-threaded software in eHive/LSF" session during the Ensembl retreat 2018
User: mateuspatricio
ensembl,Various tools that simplify working in Ensembl
User: muffato
ensembl,Python wrapper of the Ensembl REST API
User: muffato
ensembl,Efficient querying of biological databases
User: noamteyssier
Home Page: https://noamteyssier.github.io/ggetrs/
ensembl,Gexplora - user-interface to analyse genomic elements along chromosomes
User: nthomascube
ensembl,🧬 gget enables efficient querying of genomic reference databases
Organization: pachterlab
Home Page: https://gget.bio
ensembl,Management of References for Yourself
User: puriney
ensembl,Utilities for downloading and managing protein FASTA files.
User: pwilmart
ensembl,R client to the Ensembl REST API
User: ramiromagno
Home Page: https://rmagno.eu/ensemblr/
ensembl,Extract the Ensembl genes catalog to simple tables
Organization: related-sciences
ensembl,Unofficial NodeJS API client for Ensembl's REST API
User: riyavsinha
ensembl,Scripts and procedures for detecting positively selected genes and codons in primates
User: robinvanderlee
Home Page: https://doi.org/10.1093/nar/gkx704
ensembl,Ensembl's data lakehouse frontend | GSoC '22
User: rohitxsh
Home Page: https://main.d1y7s04512fj06.amplifyapp.com/
ensembl,Makefile for reference annotations for genes & genomic regions
User: stevekm
ensembl,Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
User: tariqdaouda
Home Page: http://pygeno.iric.ca
ensembl,Super fast conversion of GVF file format to VCF file format
Organization: test-blu
ensembl,The most awful genbank file you'll ever need to parse.
User: timothystiles
ensembl,genes and genomes at your fingertips
Organization: vanheeringen-lab
Home Page: https://vanheeringen-lab.github.io/genomepy/
ensembl,Explore protein variation data from the Ensembl API in a simple, yet very effective and easy to use way.
Organization: vizport
Home Page: https://vizgvar.surge.sh/
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